G125219


Basic Information

Item Value
gene id G125219
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26362212 ~ 26369525 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156955
cactaTGCAAATATCAAGtttctcaatttatttaaacaaatcaactTAGAAATATCATTGCATTTAACAAACTCTTTTAAACAcgtaaacatatttgttttccatgttccAGAAACAGGTAGAAACATCTGTTTAAATTTAGTCCTCATTATTATTGgttaggaaaacaaaagaatgatACAATTAATAAGGCAGGTTTTCTGAAGCTAAGCCAGTATTTCTCCATTGCTATACACTGTGacagaaatgcatacaaattgTTACTGGATAGTGCCACAGGCCAGTACCGTATAGATGCATACCAACCTCACTCTTTAAAGCCTCACAAACAAGATACTGTTGATATTAGTTTCAGCAACAGCCTTAAACTTAAATTGGTGTTTATGTTCatggtccttttttttttctttttaagcttTTAAGTTTGGTAAAGGCTATTTACAGTTTACATGTTCACAGCATGAActagtataaaataaaaaaataaaaataattaaacctgccagtctaaatgtatatatcacaCTGTGTCCATCAATGGCAATCCTTCTAAATACcattcttttcctttttaaaaatcaaacgaGATTAGatccctccccccaccccaccctgaAAAGacctgaagaaaaataaaataaaaacaaaactacttgCAGTGAAGAAATCTAAATGTACATCCTACAAGCTACAGCTTAAGGCAATAGAATTTCATTCCTGATACTGTATTAGTGACTCGGACTACAGATTAAAGCTGACATTAAAGACATCCTTCCTGTTTGTCAATCGGTTACATCACATATTGCACTCGATAAAATAGTTTCCTTCaaccagtttaaaaaaaaaaaaaaaaaaggcaaaatgaaATGCTTACATTCTATAATAAGTCTTctaagaatgaaaacacaaaggaaGTTACATAATCTGTAGCACAGCTCACTCACAGTATACTCAATTTTAGAAAAGGCCTTTATTTTACATATGGCTTGGCTTTTTCTATTGCAAAGAGGATACAAGAAAAGACTGACATTACAAGTACAGAACCAGTCAGAACTGTTAACATCTAAAATGTCAGGGCACAATGTAATAGTATGAAAAATACACTGAGGAAAACATTAAGCAATGTCTTGGTGTCATACACTGAAACCTCTCCCACATGAGACATAACAGGCAATCATTACAACTAGTCTGTTAAAGAATATTGGATACACATTTTTGCCCCCCTTTTGCAGTCTAGTTGAAGTACCTCACATTTGTTGTTGAATGACTGGATTATTTCACTGGAGACTAAGCATCACTGTATCACGTGCAATATGTGAAGTGTTAAAGAGAAGGGTAGGTAGCAACTCAAGGACTCTTCCTTGATATTCTTAATTTCACTGCAAATACTAGCCATAGATTTAAATTTACTATTTAGGTTAATTAACTTACATCTTTCAAAACTATTTTAGAatgaatcaaatgtttttaaccTTGTGCCCAACTGTATGTCAATGTTGTATGTTTATTCCTCTTCAAAATTCTCCACTCATTGCAGCATTGTTTACAGCGCATGGTGAGATTCAATTCACAAGCCCTGGACTGCTCTGAAGTACATGAGGCTGGTCAGGACCATAGCatttcaattttgaatgttaaaaaaagtacagtcaaaatttgtataaaattCTGTACACTTTCAAATTATTGCATAAACATGAATTTCATCAAAATAattttgcatattatttatcTTCTTTCAAGTTCAAACTCATGTTTCTCGTcttgctttcttcttctttttgacTTGCTTTGGTGATTCCCAGTTCTCTTCTGATTTTTTGTGAAGGTGGAGGCATGCTGTTTTGTTTAGCAGTAGAAACTGGAGGCTCTGGATCCGATAGCCTCTGTGGCACTTGTGAAGGGGTCTTCTTGGAAACACTCTCCAGTACAGGACTAGCCAGCTCTTTTTGTGCAAGTTTCTTCACCCAACAGGTGCACTCACAGCAGTGCTCTGGACAGGCAGGATACTCTCCTTTTCAGGATGGGCTGACAGAGTCACCTCCTCAACCTCTGCCAAAGATTCTTTTTCTTGCTCTTCGGTttAAGACAAGTATTTACTTGTGTGTTAGCCTCTTCGtcttgtttcttcttcttcttcttcttcttttttgacTTTCCACTTCCAGGAGCAGCAGAGtcagttttctctttttcatcATCAGATATCTTAACCTCCATCACAGGTTTCTCAAGATGAGTGGGAGCAGGGGCCTTTGGCTCCTCGTAATTCCCCCACAATTCAGAGGGAGCATTCCAGTCCGAGCTGGGGTCCAATGTGGAAAGGCCATCTGAAAACAATCCACATGGCACTTCAGCTAAAACTCTGATTCTACAGGTTTACAAACATCTCAATGTATTACTTCTACAGACAGGGATAGATTAATTTATGACTTCCAATGGTCTGATCCAATAATTTTTG
>TU156956
cactaTGCAAATATCAAGtttctcaatttatttaaacaaatcaactTAGAAATATCATTGCATTTAACAAACTCTTTTAAACAcgtaaacatatttgttttccatgttccAGAAACAGGTAGAAACATCTGTTTAAATTTAGTCCTCATTATTATTGgttaggaaaacaaaagaatgatACAATTAATAAGGCAGGTTTTCTGAAGCTAAGCCAGTATTTCTCCATTGCTATACACTGTGacagaaatgcatacaaattgTTACTGGATAGTGCCACAGGCCAGTACCGTATAGATGCATACCAACCTCACTCTTTAAAGCCTCACAAACAAGATACTGTTGATATTAGTTTCAGCAACAGCCTTAAACTTAAATTGGTGTTTATGTTCatggtccttttttttttctttttaagcttTTAAGTTTGGTAAAGGCTATTTACAGTTTACATGTTCACAGCATGAActagtataaaataaaaaaataaaaataattaaacctgccagtctaaatgtatatatcacaCTGTGTCCATCAATGGCAATCCTTCTAAATACcattcttttcctttttaaaaatcaaacgaGATTAGatccctccccccaccccaccctgaAAAGacctgaagaaaaataaaataaaaacaaaactacttgCAGTGAAGAAATCTAAATGTACATCCTACAAGCTACAGCTTAAGGCAATAGAATTTCATTCCTGATACTGTATTAGTGACTCGGACTACAGATTAAAGCTGACATTAAAGACATCCTTCCTGTTTGTCAATCGGTTACATCACATATTGCACTCGATAAAATAGTTTCCTTCaaccagtttaaaaaaaaaaaaaaaaaaggcaaaatgaaATGCTTACATTCTATAATAAGTCTTctaagaatgaaaacacaaaggaaGTTACATAATCTGTAGCACAGCTCACTCACAGTATACTCAATTTTAGAAAAGGCCTTTATTTTACATATGGCTTGGCTTTTTCTATTGCAAAGAGGATACAAGAAAAGACTGACATTACAAGTACAGAACCAGTCAGAACTGTTAACATCTAAAATGTCAGGGCACAATGTAATAGTATGAAAAATACACTGAGGAAAACATTAAGCAATGTCTTGGTGTCATACACTGAAACCTCTCCCACATGAGACATAACAGGCAATCATTACAACTAGTCTGTTAAAGAATATTGGATACACATTTTTGCCCCCCTTTTGCAGTCTAGTTGAAGTACCTCACATTTGTTGTTGAATGACTGGATTATTTCACTGGAGACTAAGCATCACTGTATCACGTGCAATATGTGAAGTGTTAAAGAGAAGGGTAGGTAGCAACTCAAGGACTCTTCCTTGATATTCTTAATTTCACTGCAAATACTAGCCATAGATTTAAATTTACTATTTAGGTTAATTAACTTACATCTTTCAAAACTATTTTAGAatgaatcaaatgtttttaaccTTGTGCCCAACTGTATGTCAATGTTGTATGTTTATTCCTCTTCAAAATTCTCCACTCATTGCAGCATTGTTTACAGCGCATGGTGAGATTCAATTCACAAGCCCTGGACTGCTCTGAAGTACATGAGGCTGGTCAGGACCATAGCatttcaattttgaatgttaaaaaaagtacagtcaaaatttgtataaaattCTGTACACTTTCAAATTATTGCATAAACATGAATTTCATCAAAATAattttgcatattatttatcTTCTTTCAAGTTCAAACTCATGTTTCTCGTcttgctttcttcttctttttgacTTGCTTTGGTGATTCCCAGTTCTCTTCTGATTTTTTGTGAAGGTGGAGGCATGCTGTTTTGTTTAGCAGTAGAAACTGGAGGCTCTGGATCCGATAGCCTCTGTGGCACTTGTGAAGGGGTCTTCTTGGAAACACTCTCCAGTACAGGACTAGCCAGCTCTTTTTGTGCAAGTTTCTTCACCCAACAGGTGCACTCACAGCAGTGCTCTGGACAGGCAGGATACTCTCCTTTTCAGGATGGGCTGACAGAGTCACCTCCTCAACCTCTGCCAAAGATTCTTTTTCTTGCTCTTCGGTttAAGACAAGTATTTACTTGTGTGTTAGCCTCTTCGtcttgtttcttcttcttcttcttcttcttttttgacTTTCCACTTCCAGGAGCAGCAGAGtcagttttctctttttcatcATCAGATATCTTAACCTCCATCACAGGTTTCTCAAGATGAGTGGGAGCAGGGGCCTTTGGCTCCTCGTAATTCCCCCACAATTCAGAGGGAGCATTCCAGTCCGAGCTGGGGTCCAATGTGGAAAGGCCATTTATTCCAGACCAcacatcatcagcctttatttGGCTACTATCCCACTGCAGGTCAGCATTAGTCTGGGATCCTGGTTCCTCACCAGTTACAGTGGAGGTTAATCCAAGAGTGGATATGGAAGCTGGATTCAGGTCTGCCTTCCTTATTCTTCCTTCTACTGGCCTCCATGAACCTTCAGTTTCCAGACCCCATGCAGTGCAGTTCTCTCTGTCCACACTGGAAACTGGGATCTTCATAACCTTGTTGTTCCATCCTCCACCATTCACTGTGGCCGTTTCATTCCAGCTGGCTGACACTGAGGTAAAGAACACAAAGCTAAATCAGATCTTTCACTGGActggttacacacacacactactcagTGGATTATAAGC
>TU156957
cactaTGCAAATATCAAGtttctcaatttatttaaacaaatcaactTAGAAATATCATTGCATTTAACAAACTCTTTTAAACAcgtaaacatatttgttttccatgttccAGAAACAGGTAGAAACATCTGTTTAAATTTAGTCCTCATTATTATTGgttaggaaaacaaaagaatgatACAATTAATAAGGCAGGTTTTCTGAAGCTAAGCCAGTATTTCTCCATTGCTATACACTGTGacagaaatgcatacaaattgTTACTGGATAGTGCCACAGGCCAGTACCGTATAGATGCATACCAACCTCACTCTTTAAAGCCTCACAAACAAGATACTGTTGATATTAGTTTCAGCAACAGCCTTAAACTTAAATTGGTGTTTATGTTCatggtccttttttttttctttttaagcttTTAAGTTTGGTAAAGGCTATTTACAGTTTACATGTTCACAGCATGAActagtataaaataaaaaaataaaaataattaaacctgccagtctaaatgtatatatcacaCTGTGTCCATCAATGGCAATCCTTCTAAATACcattcttttcctttttaaaaatcaaacgaGATTAGatccctccccccaccccaccctgaAAAGacctgaagaaaaataaaataaaaacaaaactacttgCAGTGAAGAAATCTAAATGTACATCCTACAAGCTACAGCTTAAGGCAATAGAATTTCATTCCTGATACTGTATTAGTGACTCGGACTACAGATTAAAGCTGACATTAAAGACATCCTTCCTGTTTGTCAATCGGTTACATCACATATTGCACTCGATAAAATAGTTTCCTTCaaccagtttaaaaaaaaaaaaaaaaaaggcaaaatgaaATGCTTACATTCTATAATAAGTCTTctaagaatgaaaacacaaaggaaGTTACATAATCTGTAGCACAGCTCACTCACAGTATACTCAATTTTAGAAAAGGCCTTTATTTTACATATGGCTTGGCTTTTTCTATTGCAAAGAGGATACAAGAAAAGACTGACATTACAAGTACAGAACCAGTCAGAACTGTTAACATCTAAAATGTCAGGGCACAATGTAATAGTATGAAAAATACACTGAGGAAAACATTAAGCAATGTCTTGGTGTCATACACTGAAACCTCTCCCACATGAGACATAACAGGCAATCATTACAACTAGTCTGTTAAAGAATATTGGATACACATTTTTGCCCCCCTTTTGCAGTCTAGTTGAAGTACCTCACATTTGTTGTTGAATGACTGGATTATTTCACTGGAGACTAAGCATCACTGTATCACGTGCAATATGTGAAGTGTTAAAGAGAAGGGTAGGTAGCAACTCAAGGACTCTTCCTTGATATTCTTAATTTCACTGCAAATACTAGCCATAGATTTAAATTTACTATTTAGGTTAATTAACTTACATCTTTCAAAACTATTTTAGAatgaatcaaatgtttttaaccTTGTGCCCAACTGTATGTCAATGTTGTATGTTTATTCCTCTTCAAAATTCTCCACTCATTGCAGCATTGTTTACAGCGCATGGTGAGATTCAATTCACAAGCCCTGGACTGCTCTGAAGTACATGAGGCTGGTCAGGACCATAGCatttcaattttgaatgttaaaaaaagtacagtcaaaatttgtataaaattCTGTACACTTTCAAATTATTGCATAAACATGAATTTCATCAAAATAattttgcatattatttatcTTCTTTCAAGTTCAAACTCATGTTTCTCGTcttgctttcttcttctttttgacTTGCTTTGGTGATTCCCAGTTCTCTTCTGATTTTTTGTGAAGGTGGAGGCATGCTGTTTTGTTTAGCAGTAGAAACTGGAGGCTCTGGATCCGATAGCCTCTGTGGCACTTGTGAAGGGGTCTTCTTGGAAACACTCTCCAGTACAGGACTAGCCAGCTCTTTTTGTGCAAGTTTCTTCACCCAACAGGTGCACTCACAGCAGTGCTCTGGACAGGCAGGATACTCTCCTTTTCAGGATGGGCTGACAGAGTCACCTCCTCAACCTCTGCCAAAGATTCTTTTTCTTGCTCTTCGGTttAAGACAAGTATTTACTTGTGTGTTAGCCTCTTCGtcttgtttcttcttcttcttcttcttcttttttgacTTTCCACTTCCAGGAGCAGCAGAGtcagttttctctttttcatcATCAGATATCTAAagtcaaaaacataaaatgccaATTAGGATGGAATGCCAAGTCTCCTAGGGAGGGTAACAACAGGGAACTTCAACTCTGGAAAGC

Function

NR:

description
60S ribosomal protein L37

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156955 False 2461 lncRNA 0.36 5 26362212 26367539
TU156956 True 2706 TUCP 0.38 8 26362212 26369525
TU156957 False 2296 lncRNA 0.35 4 26362212 26366432

Neighbor

gene id symbol gene type direction distance location
AMCG00002683 rida,LOC102789025 coding upstream 121207 26234283 ~ 26241005 (+)
AMCG00002678 nipal2 coding upstream 162951 26183699 ~ 26199261 (+)
AMCG00002675 stk3,LOC107724280,LOC107702102,LOC105907728 coding upstream 286763 26064621 ~ 26075449 (+)
AMCG00002676 stk3,LOC100711192,LOC103135175,LOC106938036 coding upstream 317875 26041287 ~ 26044337 (+)
AMCG00002677 stk3,LOC103394381 coding upstream 331545 26026545 ~ 26030667 (+)
AMCG00002691 NA coding downstream 169644 26539169 ~ 26543912 (+)
AMCG00002692 NA coding downstream 267446 26636971 ~ 26648551 (+)
AMCG00002695 LOC108273070,LOC107702088 coding downstream 352261 26721786 ~ 26731801 (+)
AMCG00002696 LOC103376374 coding downstream 376639 26746164 ~ 26748406 (+)
AMCG00002698 NA coding downstream 397367 26766892 ~ 26776595 (+)
G125109 NA non-coding upstream 499906 25854158 ~ 25862306 (+)
G125022 NA non-coding upstream 905325 25456656 ~ 25456887 (+)
G125011 NA non-coding upstream 1033351 25328180 ~ 25328861 (+)
G125005 NA non-coding upstream 1059057 25299701 ~ 25303155 (+)
G124999 NA non-coding upstream 1222940 25138980 ~ 25139272 (+)
G125220 NA non-coding downstream 3054 26372579 ~ 26376125 (+)
G125288 NA non-coding downstream 284460 26653985 ~ 26655168 (+)
G125290 NA non-coding downstream 285714 26655239 ~ 26655457 (+)
G125296 NA non-coding downstream 292199 26661724 ~ 26662436 (+)
G125320 NA non-coding downstream 414257 26783782 ~ 26784610 (+)
AMCG00002684 rpl30,LOC107702100,LOC107568279 other upstream 83075 26275314 ~ 26279137 (+)
AMCG00002661 znf706,LOC103394271,LOC100712275,LOC103364770,LOC106534503,LOC107088369 other upstream 977900 25374942 ~ 25384312 (+)
AMCG00002650 NA other upstream 1585397 24761884 ~ 24776815 (+)
G124863 NA other upstream 1939599 24422252 ~ 24422613 (+)
G124769 NA other upstream 2680827 23677935 ~ 23681385 (+)

Expression


Co-expression Network