G125269


Basic Information

Item Value
gene id G125269
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26495949 ~ 26498450 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157020
ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcaaacacaagCGCGTGTACCCAGGTCGTTGCCAATGCTGTGGCGTGAGTGGATGGTAAAATGGAGGGTAAAATGATACCAGGAGGAGCTGACAATGCCAggttaagaaaaagaaaggcattGGAGGATGACACGGCCAAATGTGCCAAACTGACAGATATGTTTTCAAGACGACAAACGAGCACACAGGAACCGGCAACTCGAGagcccgctccttctcatccatggtccctaaatggtggaatgaccttcccaccgaagtcaaaacagcagagtccttgacctccttccggcgcttactcaagacacatcttttcagacaatacttgtaatattagtcctttactctcctgtaagatagcactttacaacattttatcatgcttcttgcgttactaatacttgtattattgatttcccctttgctccctttcccgtagcccttgactgtgacctaacatcttgactgcacttagcttttactttccaggatgcaaaacctcatttattgtatttacttgtgtaaattggaatgtgtacaatgtattatgctttgaattgctttgtattatgtaaatttaaatttgtaatatttgatgccttgtactgaactgtattcttgcactttgtattgcacttgtcgacctggataagggtgtctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157020 True 736 lncRNA 0.43 2 26495949 26498450

Neighbor

gene id symbol gene type direction distance location
AMCG00002686 ubr5,LOC102786672 coding downstream 43475 26395882 ~ 26452474 (-)
AMCG00002685 rrm2b,LOC107556385,LOC108425040,LOC107394698,LOC106956493 coding downstream 104967 26382511 ~ 26390982 (-)
AMCG00002690 NA coding downstream 120053 26363962 ~ 26375896 (-)
AMCG00002687 laptm4b,LOC107702097,LOC107724295,LOC107394696,LOC107565197,LOC105907721 coding downstream 157792 26322898 ~ 26338157 (-)
AMCG00002689 NA coding downstream 176573 26318343 ~ 26319376 (-)
AMCG00002693 NA coding upstream 97681 26596131 ~ 26608752 (-)
AMCG00002708 NA coding upstream 323515 26821965 ~ 26831030 (-)
AMCG00002707 kiaa0196 coding upstream 565311 27063761 ~ 27099867 (-)
AMCG00002704 kiaa0196 coding upstream 615755 27114205 ~ 27119264 (-)
AMCG00002709 esrp1,LOC107593677 coding upstream 642675 27141125 ~ 27141425 (-)
G125200 NA non-coding downstream 253418 26242254 ~ 26242531 (-)
G125178 NA non-coding downstream 290078 26204892 ~ 26205871 (-)
G125160 NA non-coding downstream 365487 26126554 ~ 26130462 (-)
G125075 NA non-coding downstream 883652 25610117 ~ 25612297 (-)
G125035 LOC108241327,LOC106932681,LOC103371419,LOC103151587 non-coding downstream 1041951 25451215 ~ 25453998 (-)
G125291 NA non-coding upstream 157178 26655628 ~ 26655871 (-)
G125297 NA non-coding upstream 163254 26661704 ~ 26663029 (-)
G125361 fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353 non-coding upstream 415257 26913707 ~ 26915965 (-)
G125376 NA non-coding upstream 479234 26977684 ~ 26977920 (-)
G125415 NA non-coding upstream 633436 27131886 ~ 27197333 (-)
AMCG00002688 NA other downstream 190026 26283340 ~ 26305923 (-)
AMCG00002682 NA other downstream 216328 26267052 ~ 26279621 (-)
G124848 NA other downstream 2156383 24291787 ~ 24339566 (-)
G124829 NA other downstream 2234126 24261565 ~ 24261823 (-)
G124719 NA other downstream 3199834 23085994 ~ 23296115 (-)
AMCG00002694 NA other upstream 115026 26613476 ~ 26664767 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 356443 26854893 ~ 26875246 (-)

Expression


Co-expression Network