G125297


Basic Information

Item Value
gene id G125297
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26661704 ~ 26663029 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157051
TTTTCACTTtgaaaattcaatatttattgtattacagACTAAGAACAAATTATTTCAACAGAGGATTATTctcatgattaaaatgtatttatttatatcacaatGTATGAACATGTACAACATCAAGTtatatcagattatttttagttttatgtttgCTATACCTAAAGTGAATACTCCCAAGCACCCATTTCATTTGCAACCAAAAGTGACCGAtctcagcaaaataaataaataaggaaaccaTGTCTGTCCTTCGGCAACTCTGCTACACTCAGAACAAATAGTTGCTTTGTTAACAACACCTCACTATGAGTAATTTTGTCTGTAAACCTTGTTATAGTGCAACACAAAACCGAACACTTGAGGCCTGCAACATTTCAGGTGAAAtgtttgaggggaaaaaacaaactgggGGATGTAGACTTTTGAATTATAAATTGTATATGCTTATGAACAGAGacaaaatttacattaaaaggcattttattCCCATTTTTTGGTTACAGAAGTGCTGCATATTCATTTTAGTAAAGATAATTCAcgacaattaaaaataagattaaattcAAAGCGAGGTTTGGATAAATCTGTTCACTATGAATAGTGCTCAGTGAATGAAGCTCAAACGATCatagcttttttatatatatatttatttttctccatgaTATAGACAGTGCTTGCACATTTTATAACACCAAATATACAGACTTCATAAGACAGCACACACATATTGCTTTTCTGTAACACTACTTATTGTTAAAGTGGAACACTACCTCTAGGATgtaccaaatacaaataaatgaaaggatAAAAAGGTCTATCCCTCACATAAACAAGATCTAGGAGTAATGACCCACAGATGTAGCTACTGCACAGCACTACACAGATGAGGAATGcttttcacttgttttttaaatacctaACTGACCATAAATAGAGATGTTCTTTGagcacatatttatatactttgattgactgtttcattaaaaaaaaaaaaaaaaaaaaaagacacagtaGTCCACCCTGTCAAGATGAAATAATTTTACCTAATCACAGGGATCGGAGTCACAAGCGTGGATTTATccacaattaaattattttgaagtaAACTTAAGATATTTCGTTAATCTGCGTTCAACATTAAAACAGGGCATGAGGGAATGAGAGAGGTGGCTCATGTTTATTTGAAGTCGAGCAGGTTGCAGTCAATCTTGTAGTATACATACGGGTAATACTCCTGTTGGCTCAAATTCAGACCTGGTATGTCCATGGCTGCCTGTTATGGGACAATGAGAAGGAGAAATATAATGGACGTCAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157051 True 1326 lncRNA 0.33 1 26661704 26663029

Neighbor

gene id symbol gene type direction distance location
AMCG00002693 NA coding downstream 52952 26596131 ~ 26608752 (-)
AMCG00002686 ubr5,LOC102786672 coding downstream 209230 26395882 ~ 26452474 (-)
AMCG00002685 rrm2b,LOC107556385,LOC108425040,LOC107394698,LOC106956493 coding downstream 270722 26382511 ~ 26390982 (-)
AMCG00002690 NA coding downstream 285808 26363962 ~ 26375896 (-)
AMCG00002687 laptm4b,LOC107702097,LOC107724295,LOC107394696,LOC107565197,LOC105907721 coding downstream 323547 26322898 ~ 26338157 (-)
AMCG00002708 NA coding upstream 158936 26821965 ~ 26831030 (-)
AMCG00002707 kiaa0196 coding upstream 400732 27063761 ~ 27099867 (-)
AMCG00002704 kiaa0196 coding upstream 451176 27114205 ~ 27119264 (-)
AMCG00002709 esrp1,LOC107593677 coding upstream 478096 27141125 ~ 27141425 (-)
AMCG00002706 NA coding upstream 577307 27240336 ~ 27244422 (-)
G125291 NA non-coding downstream 5833 26655628 ~ 26655871 (-)
G125269 NA non-coding downstream 163254 26495949 ~ 26498450 (-)
G125200 NA non-coding downstream 419173 26242254 ~ 26242531 (-)
G125178 NA non-coding downstream 455833 26204892 ~ 26205871 (-)
G125160 NA non-coding downstream 531242 26126554 ~ 26130462 (-)
G125361 fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353 non-coding upstream 250678 26913707 ~ 26915965 (-)
G125376 NA non-coding upstream 314655 26977684 ~ 26977920 (-)
G125415 NA non-coding upstream 468857 27131886 ~ 27197333 (-)
G125473 NA non-coding upstream 702433 27365462 ~ 27365663 (-)
G125474 NA non-coding upstream 705579 27368608 ~ 27368869 (-)
AMCG00002688 NA other downstream 355781 26283340 ~ 26305923 (-)
AMCG00002682 NA other downstream 382083 26267052 ~ 26279621 (-)
G124848 NA other downstream 2322138 24291787 ~ 24339566 (-)
G124829 NA other downstream 2399881 24261565 ~ 24261823 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other downstream 3469048 23181921 ~ 23192656 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 191864 26854893 ~ 26875246 (-)

Expression


Co-expression Network