G125361 (fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353)


Basic Information

Item Value
gene id G125361
gene name fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26913707 ~ 26915965 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157134
AACTTGAAAAGCCATGCTGTTACTATGTTTGAAGTGGGGAAGCTTTCAGATGAATCCCTAGATAGTTTCTTGTTGGAACTTGAAAAGgTTGAAAGCACTGCAGAAGGAGAAGCTCAAAGATATTTTGACCATGCACTGACTCTCAGAAATACAATACTGTTTCTACGATACAACAAGGACCTGACTTCAGACCCTGAGCAGCCAAACAATGGTAATCAATGCTGAAAGCTTCTGTTTAACAAAGTTGCTGCTAACGGCAAAAGTCTTCTTTGGTGATGGTCAAACATATGTGTATCATTTATTTACTCTACtactctactactactatttacTCCCCTGCTTGATGTTATGTTGGCTTGCATACTGTGTTATGCTGCCCATGTGCTGTGTTCAGAAGACCTCTCTTCCCTACAGCAGGGATTGAGTCCTCTGCATTCAGTGTACTGTTTTGTACTATACATCTATTTTGTATTGAGGATAGCTTTGTGCTGTGATAAAATGTTGTAGGTGCCAACAAAAGGCAAACTTGGAACTTTTGCGGTTCAGAACACATCatccaaagaaagaaatggtACCTTGAATAGTGCTAAATTAGCATTGGTaacattactgttattttatatttgagttTTATTGATACATccataaaaaatactttcatatattctaaaaaaaaaaaaagtcatcaTGTTctgtagtatttgttttattgtttaattacacat

Function

symbol description
fam91a1 Predicted to be involved in intracellular protein transport and vesicle tethering to Golgi. Predicted to be located in Golgi apparatus. Predicted to be active in cytoplasmic vesicle and trans-Golgi network. Orthologous to human FAM91A1 (family with sequence similarity 91 member A1).

NR:

description
PREDICTED: protein FAM91A1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157134 True 725 lncRNA 0.36 2 26913707 26915965

Neighbor

gene id symbol gene type direction distance location
AMCG00002708 NA coding downstream 82677 26821965 ~ 26831030 (-)
AMCG00002693 NA coding downstream 304955 26596131 ~ 26608752 (-)
AMCG00002686 ubr5,LOC102786672 coding downstream 461233 26395882 ~ 26452474 (-)
AMCG00002685 rrm2b,LOC107556385,LOC108425040,LOC107394698,LOC106956493 coding downstream 522725 26382511 ~ 26390982 (-)
AMCG00002690 NA coding downstream 537811 26363962 ~ 26375896 (-)
AMCG00002707 kiaa0196 coding upstream 147796 27063761 ~ 27099867 (-)
AMCG00002704 kiaa0196 coding upstream 198240 27114205 ~ 27119264 (-)
AMCG00002709 esrp1,LOC107593677 coding upstream 225160 27141125 ~ 27141425 (-)
AMCG00002706 NA coding upstream 324371 27240336 ~ 27244422 (-)
G125297 NA non-coding downstream 250678 26661704 ~ 26663029 (-)
G125291 NA non-coding downstream 257836 26655628 ~ 26655871 (-)
G125269 NA non-coding downstream 415257 26495949 ~ 26498450 (-)
G125200 NA non-coding downstream 671176 26242254 ~ 26242531 (-)
G125178 NA non-coding downstream 707836 26204892 ~ 26205871 (-)
G125376 NA non-coding upstream 61719 26977684 ~ 26977920 (-)
G125415 NA non-coding upstream 215921 27131886 ~ 27197333 (-)
G125473 NA non-coding upstream 449497 27365462 ~ 27365663 (-)
G125474 NA non-coding upstream 452643 27368608 ~ 27368869 (-)
G125475 NA non-coding upstream 454629 27370594 ~ 27370875 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other downstream 38461 26854893 ~ 26875246 (-)
AMCG00002694 NA other downstream 248940 26613476 ~ 26664767 (-)
AMCG00002688 NA other downstream 607784 26283340 ~ 26305923 (-)
AMCG00002682 NA other downstream 634086 26267052 ~ 26279621 (-)
G124848 NA other downstream 2574141 24291787 ~ 24339566 (-)

Expression


Co-expression Network