Fish Transcriptome and Expression Database

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ecological fish

G125473

Basic Information

Item	Value
gene id	G125473
gene name	NA
gene type	non-coding
species	bowfin (Amia calva)
category of species	ecological fish

Chromosome Information

Item	Value
chromosome id	CM030136.1
NCBI id	CM030136.1
chromosome length	27394605
location	27365462 ~ 27365663 (-)
genome version	AmiCal1_2021_bowfin_Genome

Sequence

>TU157256
ATTTTATTGACCCTACCACTGCATAGGGCACATCTGTAACATGAACGCTACTGAATGGCACATACATTGAAAACTACGGAGAATTGAGACAAATCCACTATACACTTcataaataatcttaaaacgTTTCCAACCAATGCAAAACCCACTTGAAATACGTTCATTCACATTTTTGGTAAACAAATAGAGAGATTGTTACATA

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU157256	True	202	lncRNA	0.35	1	27365462	27365663

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
AMCG00002706	NA	coding	downstream	121040	27240336 ~ 27244422 (-)
AMCG00002709	esrp1,LOC107593677	coding	downstream	224037	27141125 ~ 27141425 (-)
AMCG00002704	kiaa0196	coding	downstream	246198	27114205 ~ 27119264 (-)
AMCG00002707	kiaa0196	coding	downstream	265595	27063761 ~ 27099867 (-)
AMCG00002708	NA	coding	downstream	534432	26821965 ~ 26831030 (-)
G125415	NA	non-coding	downstream	168129	27131886 ~ 27197333 (-)
G125376	NA	non-coding	downstream	387542	26977684 ~ 26977920 (-)
G125361	fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353	non-coding	downstream	449497	26913707 ~ 26915965 (-)
G125297	NA	non-coding	downstream	702433	26661704 ~ 26663029 (-)
G125291	NA	non-coding	downstream	709591	26655628 ~ 26655871 (-)
G125474	NA	non-coding	upstream	2945	27368608 ~ 27368869 (-)
G125475	NA	non-coding	upstream	4931	27370594 ~ 27370875 (-)
AMCG00002705	klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054	other	downstream	490216	26854893 ~ 26875246 (-)
AMCG00002694	NA	other	downstream	700695	26613476 ~ 26664767 (-)
AMCG00002688	NA	other	downstream	1059539	26283340 ~ 26305923 (-)
AMCG00002682	NA	other	downstream	1085841	26267052 ~ 26279621 (-)
G124848	NA	other	downstream	3025896	24291787 ~ 24339566 (-)

Expression

Co-expression Network