Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002729 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 301750 ~ 302264 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016598 | protein arginylation | biological_process |
| GO:0004057 | arginyltransferase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002729 | True | 216 | mRNA | 0.68 | 2 | 301750 | 302264 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002726 | ate1 | coding | upstream | 24959 | 263321 ~ 276791 (+) |
| AMCG00002723 | NA | coding | upstream | 117069 | 165868 ~ 184681 (+) |
| AMCG00002720 | NA | coding | upstream | 155050 | 137527 ~ 146700 (+) |
| AMCG00002721 | NA | coding | upstream | 165050 | 128714 ~ 136700 (+) |
| AMCG00002722 | NA | coding | upstream | 178986 | 110925 ~ 122764 (+) |
| AMCG00002730 | fgfr2 | coding | downstream | 48500 | 350764 ~ 382430 (+) |
| AMCG00002739 | NA | coding | downstream | 398056 | 700320 ~ 707201 (+) |
| AMCG00002736 | cdh23 | coding | downstream | 415866 | 718130 ~ 728487 (+) |
| AMCG00002735 | NA | coding | downstream | 434070 | 736334 ~ 760207 (+) |
| AMCG00002741 | cdh23,LOC106579432,LOC107679169,LOC107549130 | coding | downstream | 474326 | 776590 ~ 800016 (+) |
| G138293 | NA | non-coding | upstream | 14923 | 286551 ~ 286827 (+) |
| G138246 | NA | non-coding | upstream | 153876 | 147656 ~ 147874 (+) |
| G138321 | NA | non-coding | downstream | 125524 | 427788 ~ 428114 (+) |
| G138322 | NA | non-coding | downstream | 175972 | 478236 ~ 478456 (+) |
| G138323 | NA | non-coding | downstream | 180960 | 483224 ~ 483602 (+) |
| G138325 | NA | non-coding | downstream | 181569 | 483833 ~ 488667 (+) |
| G138327 | NA | non-coding | downstream | 188977 | 491241 ~ 492364 (+) |
| G138387 | NA | other | downstream | 592564 | 894828 ~ 898423 (+) |
| G138394 | NA | other | downstream | 608846 | 911110 ~ 913532 (+) |
| AMCG00002748 | NA | other | downstream | 622967 | 925231 ~ 930598 (+) |
| AMCG00002757 | bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 | other | downstream | 787014 | 1089278 ~ 1093079 (+) |
| G138476 | NA | other | downstream | 793675 | 1095939 ~ 1097475 (+) |
