AMCG00002737


Basic Information

Item Value
gene id AMCG00002737
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 750635 ~ 751030 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002737
ATGAGTGCGCTGGTGAACAGCTCCACGGACTCCCTGCAGACGCTGCTGCCCGGGTCGTCGCTGCCAGCTCTGTCCACCCTGTCCACCCCTGTCACCGCGCTGCCCGCGCCCTCCTCGCCGCTGCCGGTGATCGTGGCCGTGCTGTGCCTCTTCCTGCTGTTCTCCAGCTGTGCGGCGTTCCTGGCGCTGTGTCGGCCGGCCCGGCTGGGGGGCGCGGGGCGGCGGGAGGGCCTGCCCTACCACTGCGCCGACGCCAGCGAACCCCAGCTGCGGCTCTGGAAGCGCCTGGGTTCCCTGCGCCAGTCGCTGTCCTCCTTCCGACGCATGCAGCGCCCTCCCCCGCCACGCAGGAGCCCCGGCGCTGCCCAGCCCTGCCTCGACAGCAGCCAGATATGA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0035239 tube morphogenesis biological_process
GO:0048513 animal organ development biological_process
GO:0035295 tube development biological_process
GO:0009887 animal organ morphogenesis biological_process
GO:0007275 multicellular organism development biological_process
GO:0048562 embryonic organ morphogenesis biological_process
GO:0048568 embryonic organ development biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0048598 embryonic morphogenesis biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0009790 embryo development biological_process

KEGG:

id description
ko04360 Axon guidance
ko05205 Proteoglycans in cancer
ko05217 Basal cell carcinoma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002737 True 396 mRNA 0.72 1 750635 751030

Neighbor

gene id symbol gene type direction distance location
AMCG00002733 NA coding downstream 170671 564660 ~ 579964 (-)
AMCG00002732 wdr11,LOC107664693,LOC107741118,LOC107750394 coding downstream 237248 485836 ~ 513387 (-)
AMCG00002734 NA coding downstream 266335 483902 ~ 484300 (-)
AMCG00002731 NA coding downstream 458160 280814 ~ 292475 (-)
AMCG00002727 NA coding downstream 489462 254949 ~ 261173 (-)
AMCG00002738 csgr03h10orf54 coding upstream 12099 763129 ~ 768823 (-)
AMCG00002742 mrps6,LOC107754760,LOC107702688 coding upstream 77777 828807 ~ 829169 (-)
AMCG00002745 micu1,LOC107754762,LOC107702683 coding upstream 90228 841258 ~ 843720 (-)
AMCG00002744 NA coding upstream 95533 846563 ~ 853730 (-)
AMCG00002750 NA coding upstream 153425 904455 ~ 907446 (-)
G138352 NA non-coding downstream 2166 747494 ~ 748469 (-)
G138324 NA non-coding downstream 267032 483224 ~ 483603 (-)
G138303 NA non-coding downstream 363560 302082 ~ 387075 (-)
G138310 LOC106579428 non-coding downstream 379011 366207 ~ 371624 (-)
G138304 NA non-coding downstream 408117 335737 ~ 342518 (-)
G138371 NA non-coding upstream 50184 801214 ~ 801767 (-)
G138373 NA non-coding upstream 52543 803573 ~ 805155 (-)
G138430 NA non-coding upstream 143982 895012 ~ 898417 (-)
G138535 NA non-coding upstream 738532 1489562 ~ 1518053 (-)
G138559 NA non-coding upstream 1182330 1933360 ~ 1933995 (-)
AMCG00002725 NA other downstream 561298 184121 ~ 189337 (-)
G138245 NA other downstream 603795 144926 ~ 146840 (-)
AMCG00002743 psap other upstream 54730 805760 ~ 821591 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other upstream 169758 920788 ~ 925398 (-)
G138741 NA other upstream 1967178 2718208 ~ 2719419 (-)
AMCG00002828 NA other upstream 3177731 3928761 ~ 3953324 (-)
G138932 NA other upstream 3250620 4001650 ~ 4002804 (-)

Expression


Co-expression Network