AMCG00002759


Basic Information

Item Value
gene id AMCG00002759
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 1250825 ~ 1265977 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002759
ATGAGCGCCTGGAGGTACCGGCAAAAGGCAGCAGAAGGTAGCCTGAAGGCATCTGGATCAGGAATCAATGATCGGCGGAGCAGGCAGAAACCCAGTCCTAGGGCGGTCCCGAGCGAGTCCATCGACCAAGGCCTCCTGGTGCTAGCTGGGTCCGGCAGGACCGAGAGCCCCGGGACGATCTCGGCGCTGGAGGGACCGGTGGGCTCGGTGGTCCCGGCTCAAGTCACCAGGGTGACAGCGGTCTCTACCCCGGCTGTGACGTTCATGGCCAGCAACTGGACCGAGCAGACACCGACAGGTACAAGTACAATGTTTGTCTTGATGTCCTATAAGGACGATTCTCTGAAAATAACCCTTGAAGAAGACAATGCTCCAAAGGACAAAAGGCCAGTGGCTTCAACTCCGGTACCCGGATCTCCCTGGTGTGTAGTCTGGACAGGAGACGACCGCGTATTCTTCTTCAATCCCACAATGCAACTGTCTGTTTGGGAGAAACCCGTGGATCTGAAAGGCCGGGGGGATCTCAACAGGATTATTGAGGACCCCCCACACAAGCGCAAAAAGGAGTCTTTATCGgAAGAAGGGTCTCTGTCTCACCCGGAAGATGACGGCGAGGAGCTCCGAGCGAAAACGAAAAGGAACAAAATCGAAGAACCTGTGGAATCTGATCAAGAGAAGGAAGATTTAGAGGAGAAATCTGCCAAAATATCTCCCCACCGGACTGTCCTTCCATTGGAGGTGCGCATCGGTCACTTCAGGGACATGCTTCTGGAACGAAGGgtgTCAGCATTTTCCACCTGGGAAAAGGAATTACACAAAATAGTGTTTGATCCGAGGTACCTCCTACTGAGTTCAGAGGAACGGAAACAGGTTTTTGAGCAGTTTGTGAAGACAAGAATAAAAGAAGAATATAAGGAGAAGAAAAGTAAACTACAGCAGGCCaaagaagaatttaaaaaacTTCTGGAGGAGTCTAAGATAACATCCAGGTCGACGTTCAAAGAGTTTTCCGAGAAGTACGGCAGAGACCAGCGATTCAAGCaagtgcaaaagaaaaaagaccagGAACACTTCTTCAATCAGTTCGTAAATGCTCTGAAGAAGCGCGACAAAGAGAACAGACTAAGACTGAGGAAGATGAGATGA

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002759 True 1146 mRNA 0.51 9 1250825 1265977

Neighbor

gene id symbol gene type direction distance location
AMCG00002761 NA coding upstream 34661 1204818 ~ 1216164 (+)
AMCG00002760 NA coding upstream 143279 1103748 ~ 1107546 (+)
AMCG00002753 NA coding upstream 241869 991584 ~ 1008956 (+)
AMCG00002746 NA coding upstream 346471 899823 ~ 904354 (+)
AMCG00002747 mcu coding upstream 357633 890675 ~ 893192 (+)
AMCG00002763 ebf3 coding downstream 164014 1429991 ~ 1436902 (+)
AMCG00002766 LOC108249661,LOC105028844,LOC106604646,LOC106611650,LOC106613918 coding downstream 217039 1483016 ~ 1492755 (+)
AMCG00002765 NA coding downstream 239020 1504997 ~ 1513084 (+)
AMCG00002770 NA coding downstream 753261 2019238 ~ 2022826 (+)
AMCG00002774 NA coding downstream 967310 2233287 ~ 2240892 (+)
G138475 NA non-coding upstream 162009 1088439 ~ 1088816 (+)
G138399 NA non-coding upstream 312330 938147 ~ 938495 (+)
G138393 NA non-coding upstream 339745 909387 ~ 911080 (+)
G138385 NA non-coding upstream 401152 843528 ~ 849673 (+)
G138379 NA non-coding upstream 409097 819326 ~ 841728 (+)
G138502 NA non-coding downstream 109730 1375707 ~ 1395263 (+)
G138562 NA non-coding downstream 672170 1938147 ~ 1939125 (+)
G138593 NA non-coding downstream 794400 2060377 ~ 2060604 (+)
G138634 NA non-coding downstream 1195661 2461638 ~ 2463636 (+)
G138712 NA non-coding downstream 1399481 2665458 ~ 2667538 (+)
G138476 NA other upstream 153350 1095939 ~ 1097475 (+)
AMCG00002757 bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 other upstream 157746 1089278 ~ 1093079 (+)
AMCG00002748 NA other upstream 320227 925231 ~ 930598 (+)
G138394 NA other upstream 337293 911110 ~ 913532 (+)
G138387 NA other upstream 352402 894828 ~ 898423 (+)
G138506 NA other downstream 135312 1401289 ~ 1402429 (+)
AMCG00002762 NA other downstream 140634 1406611 ~ 1410088 (+)
AMCG00002784 NA other downstream 1226109 2492086 ~ 2494594 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other downstream 1841481 3107458 ~ 3116081 (+)
G138888 grid1,LOC106607602 other downstream 2162712 3428689 ~ 3596108 (+)

Expression


Co-expression Network