AMCG00002765


Basic Information

Item Value
gene id AMCG00002765
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 1504997 ~ 1513084 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002765
TTGAACGAGCCGACTATTGACTACGGGTTCCAGAGGTTGCAGAAGGTCATCCCCAGACATCCAGGTGATCCGGAGAGGTTACCCAAGgAGGTGCTGTTGAAGCGAGCAGCTGACCTTGTAGAAGCTTTGTACGGCATGCCCCACAACAACCAGGAGATCATCCTAAAGCGGGCGGCCGATATCGCCGAAGCTCTGTACAGCGTACCTCGTAATCACAACCAGATCCCGTCTCTGGCCAATACCCCGTCGCACAGCGGCATGATGGGAGTGAATTCCTTCAGCAGCCAGCTAGCAGTCAATGTATCAGAGACATCACAGGCTAATGACCAAGTGGGCTACAGCCGCAACACGAGCAGCGTGTCCCCCCGCGGATACGTCCCGAGCAGCACCCCCCAGCAGTCCAACTACAACACAGTAAGCAACAGCATGAACGGCTACGGCAATGCAGGGATGCCCAACCTGGGCGTGCCCAGCTCTCCGGGCTTCCTCAACGGGTCCTCGGCCAACTCCCCCTACGGCATAGTGCCGTCAAGTCCTACCATGGCGGCCTCTTCTGTCACCCTCCCTTCGAACTGTAGCAGTACACACGGCATTTTCTCATTCTCACCTGCCAATGTCATCTCTGCAGTGAAACAAAAGAGCGCCTTTGCCCCCGTTGTCAGGCCCCAAGCATCGCCACCTCCTTCTTGCACCAGTGCAAATGGCAATGGACTACAAGGTGAGACGCCCTCCCTCCTTTTCCTAGTGTCCCGCAGACTGTGTCACCTGTCGTGGTCGCCCGGCGCACTAAAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002765 True 795 mRNA 0.57 5 1504997 1513084

Neighbor

gene id symbol gene type direction distance location
AMCG00002766 LOC108249661,LOC105028844,LOC106604646,LOC106611650,LOC106613918 coding upstream 12242 1483016 ~ 1492755 (+)
AMCG00002763 ebf3 coding upstream 68095 1429991 ~ 1436902 (+)
AMCG00002759 NA coding upstream 239020 1250825 ~ 1265977 (+)
AMCG00002761 NA coding upstream 288833 1204818 ~ 1216164 (+)
AMCG00002760 NA coding upstream 397451 1103748 ~ 1107546 (+)
AMCG00002770 NA coding downstream 506154 2019238 ~ 2022826 (+)
AMCG00002774 NA coding downstream 720203 2233287 ~ 2240892 (+)
AMCG00002773 NA coding downstream 740945 2254029 ~ 2257547 (+)
AMCG00002776 NA coding downstream 836965 2350049 ~ 2374439 (+)
AMCG00002777 NA coding downstream 892951 2406035 ~ 2440932 (+)
G138502 NA non-coding upstream 109734 1375707 ~ 1395263 (+)
G138475 NA non-coding upstream 416181 1088439 ~ 1088816 (+)
G138399 NA non-coding upstream 566502 938147 ~ 938495 (+)
G138393 NA non-coding upstream 593917 909387 ~ 911080 (+)
G138385 NA non-coding upstream 655324 843528 ~ 849673 (+)
G138562 NA non-coding downstream 425063 1938147 ~ 1939125 (+)
G138593 NA non-coding downstream 547293 2060377 ~ 2060604 (+)
G138634 NA non-coding downstream 948554 2461638 ~ 2463636 (+)
G138712 NA non-coding downstream 1152374 2665458 ~ 2667538 (+)
G138719 NA non-coding downstream 1178345 2691429 ~ 2691840 (+)
AMCG00002762 NA other upstream 94909 1406611 ~ 1410088 (+)
G138506 NA other upstream 102568 1401289 ~ 1402429 (+)
G138476 NA other upstream 407522 1095939 ~ 1097475 (+)
AMCG00002757 bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 other upstream 411918 1089278 ~ 1093079 (+)
AMCG00002748 NA other upstream 574399 925231 ~ 930598 (+)
AMCG00002784 NA other downstream 979002 2492086 ~ 2494594 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other downstream 1594374 3107458 ~ 3116081 (+)
G138888 grid1,LOC106607602 other downstream 1915605 3428689 ~ 3596108 (+)
G138941 NA other downstream 2516440 4029524 ~ 4029924 (+)
G139176 NA other downstream 3583647 5096731 ~ 5098744 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location