AMCG00002786


Basic Information

Item Value
gene id AMCG00002786
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 2601763 ~ 2603607 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002786
atgCCTGTCTCCAGCAAGCACTCGGGTATTGGTCGTTCTCAGAGCTGGGACGCGGCTGGCTGGTATGAGGGCCACTGGGACGGAGAGGGCAGCTACGAGTACCAGCCCAGGCTTCCCGGCGGCCGGAGGAACTCTCTAACGTACGGGGGAGACGGAGGCGGGGGCTGGTACGAGCCTCCCCCCGGGGTGCGCCCCAGTGAGCTGGAGCTGAAACGAGACCCTTACTCTTACCCAGAGCCCGTCTACGACCCCGGATACCCTGACAGGACAGAGCGCCGGCCCCTGAGGAAGAGCTCCGTGCCGGAGCTGAACAGCCACTACGACAGGCCAGCCATGGCAGCCCGGGGCTCTCTGCCTCCGCAGGATTACTACCACCACGACCCTGCCATCGCTGCCCGGCCGCCCGAAGACCCGCGGGGCTTTTATAGGGGGGAGCAGCACCTGCTTAACAGATCAGCGCCGCATTATGGGATGACCAGCGGGGGCCGGCCAGCTTGGGATCAAGGACAAGCCAGGCCTGCGCCTCCcgcccctcctcctccgcctcctacAGCACACGAGATGAGCCGCCTCTACAGGGATCCCTCTGTCACCAAGATGATGCCAGACGGCCAGCGCATCCGCAGCCAGGACCCTTCCCCGGCCCGCTACGGCACCGAGCCTCCCGCTCCCAGGTACGGGGCTGAGCCGCCCACCCACGGAGGCCGCTCCATCTACAGTGATGTCAATGGGCGGCCCCTGGACCCACGGCAGGCCACAGCAACCTGCCTGGTGGTGGACCCAGGCTCTCAGGGCCTGGAGGGCGGCCCAGGCAGCGTCCCACGTGGGATGGCACTGCGGCAGGATAGTGCCTCACCCTATGGCCCCCAGGTGGGCCAGAAGATGAGCTACGACGGCTACGACCCCAACACCGGCACCCCGATGGCCACAGGGATGCCGATGCACCAGTCCCACAGCGCAGCCGCGGCGGACCTGAAGAAGAACGTGGACCCGGAGTTCCTGGCGCTGCTGCGTGCGGAGGGGCTGTCGGAGAGCACGGTCACGGCGCTGCTACAGCAGGGCTTCGACTCGGCCGGCCTGCTGGCCGTCATGGAGGAGAACGATGTGCGCTCGGTGGCGCCCAACCTGGGCCAGGCCCGAGTGCTCTCCCGCGTGGCGCTCACCTGCAAAACGGAGCTGCAGCGGCAGCACGAGGCGCCCCTGGCCGCCCAGCAGCAGCGCATGCGCACGCGCTCCAACAGCTTCAGCCACCGCAACGACCTATACCTGCAACAGCAGGGCCTGGATGCCAACGTGGCGCCACCACCGCTCGGCTCGCTGCAGACCATGACGACCCGCATGGGGGAGGTCATGGGCAGGAGGCCCAACAGTGCCCCCTCACAACATCTCCTGGAGACCACCAGCTACCCCGGGGGACGCTCCCTGGGGGGCTTCCCGCTCAGCCCAGGTGGATACAGCAACGCGGGGCCCCAGACTCGGCCCATGTCTGCATACACCCCCCACGGCGGACCGCTCAATGTGTCCGGCGTGCAGCCGCCGCCGCCCCCCGCCACGCCCAGCTCGGCCCCCAAGACAGCATACTCTACCACCTACACGGTGCCCATGGAGCTGATGAAGAGGGACCGCAGCCACCCACCCATGTCGCCCATGCAGAGCCCTCACAACAGCCCCCAGCTGCTGAGGAAAGGTGGGCCGCAGGGCGAGAGCAGCATGATGCCCATGGGCTCCACCCTGCAGGTGCAGAACTCCAACGCTGTCAACCAGAAGCTCACGCGGCGCACCGGCCCCCCAGTCATCGTGTCCACCATGGCGTCGCCCGACTCAAGTAACTCGACATTCTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002786 True 1845 mRNA 0.67 1 2601763 2603607

Neighbor

gene id symbol gene type direction distance location
AMCG00002778 NA coding upstream 125157 2471904 ~ 2476606 (+)
AMCG00002779 NA coding upstream 131096 2464480 ~ 2470667 (+)
AMCG00002780 NA coding upstream 141926 2450190 ~ 2459837 (+)
AMCG00002777 NA coding upstream 160831 2406035 ~ 2440932 (+)
AMCG00002776 NA coding upstream 227324 2350049 ~ 2374439 (+)
AMCG00002789 NA coding downstream 19032 2622639 ~ 2623681 (+)
AMCG00002788 ctbp2,LOC102290675,LOC102209184,LOC102797539,LOC101467118,LOC100698659 coding downstream 22376 2625983 ~ 2633638 (+)
AMCG00002787 NA coding downstream 52423 2656030 ~ 2660008 (+)
AMCG00002793 NA coding downstream 90919 2694526 ~ 2704574 (+)
AMCG00002792 NA coding downstream 103358 2706965 ~ 2723778 (+)
G138634 NA non-coding upstream 138127 2461638 ~ 2463636 (+)
G138593 NA non-coding upstream 541159 2060377 ~ 2060604 (+)
G138562 NA non-coding upstream 662638 1938147 ~ 1939125 (+)
G138502 NA non-coding upstream 1206500 1375707 ~ 1395263 (+)
G138475 NA non-coding upstream 1512947 1088439 ~ 1088816 (+)
G138712 NA non-coding downstream 61851 2665458 ~ 2667538 (+)
G138719 NA non-coding downstream 87822 2691429 ~ 2691840 (+)
G138816 NA non-coding downstream 569300 3172907 ~ 3177610 (+)
G138871 NA non-coding downstream 772639 3376246 ~ 3378027 (+)
G138903 NA non-coding downstream 1123890 3727497 ~ 3727731 (+)
AMCG00002784 NA other upstream 107169 2492086 ~ 2494594 (+)
AMCG00002762 NA other upstream 1191675 1406611 ~ 1410088 (+)
G138506 NA other upstream 1199334 1401289 ~ 1402429 (+)
G138476 NA other upstream 1504288 1095939 ~ 1097475 (+)
AMCG00002757 bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 other upstream 1508684 1089278 ~ 1093079 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other downstream 503851 3107458 ~ 3116081 (+)
G138888 grid1,LOC106607602 other downstream 825082 3428689 ~ 3596108 (+)
G138941 NA other downstream 1425917 4029524 ~ 4029924 (+)
G139176 NA other downstream 2493124 5096731 ~ 5098744 (+)
G139492 NA other downstream 3544141 6147748 ~ 6153120 (+)

Expression


Co-expression Network