AMCG00002792


Basic Information

Item Value
gene id AMCG00002792
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 2706965 ~ 2723778 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002792
CCACCACAGCGTTTACTCCAGTCATCAAACCACAGCCTTACTACAAAGAAGTGTGTTTGCTGGGGAGCAAAACGGCTGCGGGAATAAACGCGTGTTTTGCTCTCCgcggagccggagcggagccGGAGCGGACGGGCCAAGTGAGCTGCGGTGGGCTGCTCTGCTGCAGACGCGCAACACGCAACGCGATACACGTAGGAACCGGCCGGGCGGCTCCCGCACAGTGCGTGACACCCTCGGGCCGGTACGTGAGCTCCGCCCCGCCTGTGCGGTACTGTGACGGCGTGCGGCTCCGCTCTGTGTTGCGCTGCGGCCGCTCGGCGAGGCGGTGTGTTGCAGCGGCTCCGTGTTGTGCCCGGCGTTGTGCGCTGTGCCAGGCTGGCGGCTCTGCTCCGCGCTGGGCTTGTGCTGTGAGAAGAGCCGAGGATGCCCCGGGTTTGAGGGGAAGCAGCCACTGATCCGCAGGACTGACAACATGCTCCTTCCCGGGCAGGAGGAGGTGAGGGGACCATCCCAGTAGAGCCCACGGGACCACAGACCGTTGACGCCACGGGCCGCCCGTAAAGATGGCCTCCGGGAGCCTCCGCCTGCACCGCAACGCACCGGGCCAAGGATGTGCCTTACCATGGTGATCATTCACACGAAAACACTGGAAAGGAAGAAGGCCGTCGATTATGTAACGTCCAAGGCGACCGACTCGGAGCTGAGCGACGGGTGGCGGGACCGGGGCCGGAGCTGTGCCTTCCAGAGGGAGCCCGGCCGTGCCAGCCTGGAGAGCCTGTGGGACGTCCTGCCCGAGGCGTGCCAGGGGCGTGGGGGGTGGACCCGGGAGCCCGGCGCTGCCAGCACCATCACCAGCCTGATCCGGGACCTGAGCCTGAGCGACGCCAAGGCCGCCCCTCCCGCCGCTCCCCCCAGCAAGCGCCAGTGCTGCTCGCTGTCCCTCTCGGACGAGCCGGGCTCGGGCCGGGTGTGGCGGCCGCAGGGCTCGCGGGTGTGGACGGCTGTGGAGAAGCGGCGCTGCCACAGCGGGGGCAGCGTGACGCGGGGACCCTCCTCGGGTGGCGGGCTGGCAGGGTATCCCATCATGCAGCGCAGCTCCAGCTTCAGCCTGCCGGCCCGCTCCAACGCCCTGCCCCTGAACTTTGAGCTGCCCTGCCTCGCCCAGCGCCTGCCCGGCCTGCCCTTCACTGGCTTCcagccctccccctcctccccctcctcccacaGAGCGGGCCTGGACCCGTCTGACCCGGCGcggcccctctccctctcccacgaACAGATCTGCCCCCTCGGGCAGCGCCGGCCCTCCGCCAGCAGCTCCCCCGACTCCACGCCCGAGCTGGGCCGCCGCGCCAGGCCCGGGGGTCTGGCCAGGAGCCGCTCGCAGCCCTGCGTCCTGAACGACAAGAAGATCGGCATGAAGCGCAGGAGGCCCGAGGACGCCCAGGAGAAGAGGCCCTCCCTGGACCTGGCCAAGATGACTCAGAAACTGCAGAATTTCCACAGCCTCAGTGGCCCGGGCATCACGGCGGCCGACTTGCACCAAGCCCTGTCCCCCCGCGGCAGCCCCGGCCAGTGTGCGGGCGCCTCTGCCCCTGGGGGGGACCCGGATATGGAGCCGCGGCAGAACACTGACGAAGAGGGCAGGGAAAACGGGGAATACTCGTCCAACGAGGAGCTGGACTTCGAAGCCACCGGGGGCGGGGGCTCGAAGAGGGAAGGTGTGAACGGGAAGCAGGAGTGCGGGGCGAGCTGGCAAGAGCCATGTGTCACTGGGAAGGATGTCTTCCGACTGGGCGAGGAGCTGGACATTGAGCAGATTGAGAGGAACTGAACAGGGGCTCGATCCCTGGAGCTCCGGGCGGAGTGTGTGACCAGGAGGGTGTGGTTCTCCAGCAAATGGACACAGGAAGGCCGGGCCTCGCTGGGCCGGATCGGAAAAGCCACCCCAGTCGGGTCAGGTCGATGTCCGGATGCTCTATTTGGCCCGAGCGCTCGCTCAGTTGTCCTGCTTGATTGCCCTCTGTCTGTGGGGCGGGAAGGGGCAGAGTCCCGGGGGCTGGTCTCCTGCTGGGGTTGGGGACTCGTCGATGACATTAACGTGACGGGGGCCCTCGGTGACGCTTCCTCCCCATGTGCTGGAGCCCGTGATCTCCCAAAGGCAGAAGCATTGCTGTCAAAACATGGCCGATTTGATTGGCATTTCCCCCCCTCCGTGCCGCACACAGCCACACTCACCCGGCTTCACAACTTGCACCATAACCAGGTCGTCAAACGCCACAAGTGCTCGATTTGTACCCAGAGCTGTCCtctatatttttctgaaaaggattctatataattttgtttaaaaaatctTTGAATGATTAGTTTTTAACTGCAAATCCAGAAAGAAagcattataatatttttatacaaataaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002792 True 2430 mRNA 0.65 4 2706965 2723778

Neighbor

gene id symbol gene type direction distance location
AMCG00002793 NA coding upstream 2391 2694526 ~ 2704574 (+)
AMCG00002787 NA coding upstream 46957 2656030 ~ 2660008 (+)
AMCG00002788 ctbp2,LOC102290675,LOC102209184,LOC102797539,LOC101467118,LOC100698659 coding upstream 73327 2625983 ~ 2633638 (+)
AMCG00002789 NA coding upstream 83284 2622639 ~ 2623681 (+)
AMCG00002786 NA coding upstream 103358 2601763 ~ 2603607 (+)
AMCG00002795 NA coding downstream 38814 2762592 ~ 2764651 (+)
AMCG00002796 NA coding downstream 42980 2766758 ~ 2766973 (+)
AMCG00002794 LOC108416076,LOC108417123,LOC108417122,LOC107746757 coding downstream 44673 2768451 ~ 2776607 (+)
AMCG00002800 LOC106512385,LOC106562767 coding downstream 141665 2865443 ~ 2885096 (+)
AMCG00002801 cpxm2 coding downstream 186175 2909953 ~ 2956770 (+)
G138719 NA non-coding upstream 15125 2691429 ~ 2691840 (+)
G138712 NA non-coding upstream 39427 2665458 ~ 2667538 (+)
G138634 NA non-coding upstream 243329 2461638 ~ 2463636 (+)
G138593 NA non-coding upstream 646361 2060377 ~ 2060604 (+)
G138562 NA non-coding upstream 767840 1938147 ~ 1939125 (+)
G138816 NA non-coding downstream 449129 3172907 ~ 3177610 (+)
G138871 NA non-coding downstream 652468 3376246 ~ 3378027 (+)
G138903 NA non-coding downstream 1003719 3727497 ~ 3727731 (+)
G138905 NA non-coding downstream 1201391 3925169 ~ 3928654 (+)
G138927 NA non-coding downstream 1266146 3989924 ~ 3990348 (+)
AMCG00002784 NA other upstream 212371 2492086 ~ 2494594 (+)
AMCG00002762 NA other upstream 1296877 1406611 ~ 1410088 (+)
G138506 NA other upstream 1304536 1401289 ~ 1402429 (+)
G138476 NA other upstream 1609490 1095939 ~ 1097475 (+)
AMCG00002757 bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 other upstream 1613886 1089278 ~ 1093079 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other downstream 383680 3107458 ~ 3116081 (+)
G138888 grid1,LOC106607602 other downstream 704911 3428689 ~ 3596108 (+)
G138941 NA other downstream 1305746 4029524 ~ 4029924 (+)
G139176 NA other downstream 2372953 5096731 ~ 5098744 (+)
G139492 NA other downstream 3423970 6147748 ~ 6153120 (+)

Expression


Co-expression Network