AMCG00002801 (cpxm2)


Basic Information

Item Value
gene id AMCG00002801
gene name cpxm2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 2909953 ~ 2956770 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002801
tctctctctctctctctatttttttttccctagaAAGAATTCACATGGACCCCCTGGCTCTAGAGCAGACACCACTGACTCGGAGCTTGCAGAAAAGTTTGTAAACTGTCGTCCTGGAGCCCGGGAGCTGATGGGACTGACAGAGACTCGGCAGGGACCTATCAAGCCCAGCCGCCCGAGCCGTCTGACCCCAGCCCGCCTGTAGCCACCACTGGAGTAACCGGATCCCGGCGATTATGTTCCCTTTGGTGAAGAGAGGATATTGTTCAGCGTTGCTCGCTCTCTCCCTGCTCGGGCTACTCCTGGATTGCACCCACGGGACCCCGGCGGAAGATGAGGATTACTACCTGCAGGAAATTCTCAACAGGGAGCATTACTACTCCATCCCGGGACTCGAGGAGCCGCTGTCCTACACAGAGGGGCCAGAGGAAGCCGAGCCGCCGGTGGGGGGCGGTCGTGGCCCCGTGACCGGTAAGAAAGAGCAGAAggggaagaaggagaaggagaggcacGCGGAGAAGGGCGCCGCGGAGGCAAAGACAGccaaaaatgggaataaaaaagctgagaaaaacaacaaaaagggaAACTGGAAGACTCCGAACGGCAGCCAGGAAGGAGAGAGCCACTTTGTGCCTGTGAGAGAGGaATGCCCCCCCATGGGCCTGGAGACCCTGAAGATCGATGACTTCCAGCTTCACGCCTCGACGATCAAGCGCTACGGCCTGGGCGCGCACAGGGGACGTCTCAACATACAGGCCGGCATCTACGAGGATGATTTCTACGACGGGGCATGGTGTGCTGGCAGGAACGACCCCCTGCAGTGGTTCGAGGTGGACGCCAGGAGACTCACGAAGTTCACTGGCGTCATTACGCAGGGCCGGAACTCGCTGAGCGACTGGGTGACGTCCTACAAGGTGATGGTGAGCAACGACAGCCACACCTGGGTGACGATCAGAAATGGGACTCACGACATGATATTCCCTGGGAACCATGAGAAGGAGATCCCCGTGGTCAACGAGTTTCCCATGGCCGTGATTGCCCGCTACATCCGCGTGAACCCACGCTCCTGGTACGAGAACGGCAGCATCTGCATGAGAGTGGAGATCCTGGGCTGCCCGATGCCAGACCCCAATAATTACTACCACAGGAGGAATGAGATCACGACCACAGACAACCTGGACTTCAAACACCACAGCTACAAAGAGATGAGACAGCTGATGAAAGTGGTAAACGAAATGTGTCCCAACATCACAAGAATTTACAACATCGGCAAAAGCCACAACGGGCTGAAGCTGTACGCCATCGAGATCTCGGACCGCCCCGGGGAGCACGAGCTGGGCGAGCCGGAGTTCCGCTACACGGCGGGCTCCCATGGAAACGAGGTCCTGGGCcgggagctgctgctgctgctgatgcagTTCATGTGCCAGGAGTACCTGTCCGGCAACCCGCGGGTCACACGCCTGGTGGAGGAGACGCGCATTCACCTGCTGCCCTCGGTCAACCCGGACGGCTATGAGAAGGCCTTCGAAGTGGGCTCGGAGCTGGGGGGATGGTCGGTGGGTCGGTGGAGTCTGGACGGCCTGGACATCCATCACAACTTCCCAGACCTCAACTCCATCCTGTGGGAGGCGGAAAACCGGAAGTGGGTCCCAAGGAAAGTGCCCAACCACCACGTGCCCATCCCAGAGTGGTACCTGTCGGACAACGCCACCGTGGCGATGGAGACCCGCGCAGTGATCTCCTGGATGGAGAAGATCCCCTTTGTGCTGGGCGGGAACCTGCAGGGCGGGGAGCTGGTGGTGACCTTCCCCTACGACATGACACGCTCGCAGTGGAAGATGCAGGAGCAGACGCCCACGCCGGACGACCACGTCTTCCGCTGGCTGGCCTTCTCCTACGCCTCCACGCACCGCCTGATGACTGACGCCAGCCGGCGCGTCTGCCACACACAGGACTTCGCCAAGGAGGACGGCACCATTAACGGGGCCAACTGCTTCGAGCTGTCGATGTACGTGGGCTGCGACAAGTTCCCCCACGAGAGTGAGCTGCCGGAGGAGTGGGAGAACAACCGCGAGTCTCTGCTCGTGTTCATGGAGCAGGTCCACCGAGGGATCAAGGGCGTGGTGCGAGACATGCAAGGCAGAGGCATCGCCAACGCCCTCATATCGGTGGAGGGAATCAACCACGACATCCAGACAGCGTCGGACGGGGACTACTGGCGGCTGCTGAACCCGGGGGAGTACAAGGTGATCGCCCGGGCAGAGGGCTACACGCCAGCCAGCAAGGTGTGCGAGGTGGGCTACGACATGGGCGCCACGCGTTGCGACTTCATCATCAGTCGCACCAACCTGTCGCGCATCAAGGAGATCATGGAGAAGTTCGGCAAGCAGCCCATCAACCTGCCCGTCCGGCAGCTGCGGCAGAGGAGCCGCCAGAGACGCCGGCACACATAGGGACAGACTCTGAAATGAGTTATTGACAACGAAAGACTGAGATGAATAGATCCATGCACAAACGAATACcgcagtaaataaataagggcCCGATTCACGTCAGGACTTCAGCCTGTGTGCCATGTTCAGTTTGAGAAGAAATCTGCTTTGGGGATTGTTTATGGCGCTTGGTAGAGGTTGTGGTTTAATCTAATGGTTTAAGATAATAAAAACTCGTTCTTTCCTGTTGAGAGTTGACAGCCACCAGAGAGATCCTCAGTGTGACGTCACTGTTAAACATCGAATCCTGAAAACGGCTTCAATTCTGGTCCAtggattatgtttttatttcttaatctgCTCCTTAAAACAGTATgttgaaacaaaacaactacTTTAACaacaatttccatttttttctgcTGTCATTGTCGGGCGTTCAGTGAATCTCAGTGCTCAACTATTAAGCATCAGCTCAAAGTattcctttcctttgtcttgGAAGGGGAACAAGTGTCAGAATGTAGAAGTGTGATTGTGTCCTGAtttgattatgatgatgatgattgataGGATGGCAAAGTACCCAACTGTCAGTTCAAAACTTCAGTTCAAAACATACACCGGCCCTCCGTTCGAAAAAGGCAAATCAAGTGTTGGGTTTGAAACGTGTAATTTGCTAATGTGTATTCTTTTAAATCTAGTCTTCTGTTCAGTCGGCTACAGATTAATCGTTTGTGTGATTGAAGTTAACGGGCAATAAGCTGTTGATGATTTGATGGCTTTGCAAAGGGCTTTATTCCAGATCTGTTGAGGGTTTAAACAGTTTATACAGGACTGAATTGGTGCTGTAGGACCCTAAGTATCTTCCACTTGAAGTGATTAAGTGAGagcagattaaatcaaatcacatcTTCCTCAGCATGACTTTCATTACAAGAGTTAAACTGCTACAgatataaagacaaaaatacagaaatcaaaataaaatgtataaaatcaaccaaccaaccaatcaatcaatctatgtatccaatataaaatcaatttgaagCTGCCTGCACATTTCATATTCCAATATGACCTGGTCGAAGTCGATCAGCACTTCCCAAAAATATCCCATTGCATTATctagttcatttttaaaactgtttgtaAGGTCTTAACGAGTTCCTAAGGTGATGATCAATATATCGACTGAATGAGACAACCACATCTCTATTCCCTAAAATTAAGTATAGTGCACGGTCTCTGTCCACTCTGTCTGCTTTCTGGTGGTTGTATGAGAAGTGCAGAGTGTTATTGTTCGGCGTCTGAATGAAAGGACTTTGTCTGATTTGCAGCATTTGTCGAGGTTTTACACAGAGTATCTGCATAGTCACGTTACTAGTCAGAGAAACTGCATGAGGCAAAAAGGTGAGGCAATCAGACAGCCTGTTCAAGAGCCAGTATTTATATTAGCCATGTAACTAACGTGTGTGGAAATATCTTTTTCAGCTGACGAAGAAAATGCATTCAGTGCTTTACGGTAAAGATAAGCAGCATATAGTGAATCATTTTACTGAGATAATTACTCCCTGTGAAATAAAAAGACCACACcacatacagatacacattCCATTCTCATGCAGATTATTCTGTCATGCCATTGTCTACGGTATTCCAAACATTTAGGATCCTTTCTCTGTAATAATCTTCCAAATTGAGTAAGTTtgatttggtttgtgtttgtgttaaatttGTGGAGGCTTAATTGGAAATTCATTGCAGAAATACAATATCTGGTCAGTTTCCTGTCCTATCAATGAGATTGTTTCACTGTTTCTTAATTGCATAATTAACCATGTTTCCTATATGTACTCTGAAGAGAACTGTATTTATGTTCAGGATGACACACGGCTGTTATTGATTTTGTGAAATGAACGGACACTGtatgtgcatgcatgcatgtcaTATTTATTCAGTGTTTAAACCGCAAACTgctatgtctttttttttttacagtaaattatatCCTATCCAGTTGTCTTGcactttaattaaagaaaagcatCAGAGCACCTCTGCTGTAAACTGCTTGTGTTTGGGGGATTGTGACGCTATAGGTCATTTATATGCAGGGACACTAATTGGAAGTTTTCCAATATAATCATGCTTTCCCCTTAGAATCAACACCTGTATCGTTTCCCTCTCAGATATTGTCTCAGTCCTGCATAAACGGGCAGGACAGGACTT

Function

symbol description
cpxm2 Orthologous to human CPXM2 (carboxypeptidase X, M14 family member 2).

NR:

description
PREDICTED: inactive carboxypeptidase-like protein X2

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0007155 cell adhesion biological_process
GO:0004181 metallocarboxypeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08639 CPXM2; carboxypeptidase X2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002801 True 4673 mRNA 0.49 14 2909953 2956770

Neighbor

gene id symbol gene type direction distance location
AMCG00002800 LOC106512385,LOC106562767 coding upstream 24857 2865443 ~ 2885096 (+)
AMCG00002794 LOC108416076,LOC108417123,LOC108417122,LOC107746757 coding upstream 133346 2768451 ~ 2776607 (+)
AMCG00002796 NA coding upstream 142980 2766758 ~ 2766973 (+)
AMCG00002795 NA coding upstream 145302 2762592 ~ 2764651 (+)
AMCG00002792 NA coding upstream 186175 2706965 ~ 2723778 (+)
AMCG00002803 NA coding downstream 90706 3047476 ~ 3051879 (+)
AMCG00002804 NA coding downstream 213573 3170343 ~ 3172461 (+)
AMCG00002810 NA coding downstream 238370 3195140 ~ 3198501 (+)
AMCG00002814 NA coding downstream 300276 3257046 ~ 3267033 (+)
AMCG00002816 LOC106607591 coding downstream 391412 3348182 ~ 3348766 (+)
G138719 NA non-coding upstream 218113 2691429 ~ 2691840 (+)
G138712 NA non-coding upstream 242415 2665458 ~ 2667538 (+)
G138634 NA non-coding upstream 446317 2461638 ~ 2463636 (+)
G138593 NA non-coding upstream 849349 2060377 ~ 2060604 (+)
G138562 NA non-coding upstream 970828 1938147 ~ 1939125 (+)
G138816 NA non-coding downstream 216137 3172907 ~ 3177610 (+)
G138871 NA non-coding downstream 419476 3376246 ~ 3378027 (+)
G138903 NA non-coding downstream 770727 3727497 ~ 3727731 (+)
G138905 NA non-coding downstream 968399 3925169 ~ 3928654 (+)
G138927 NA non-coding downstream 1033154 3989924 ~ 3990348 (+)
AMCG00002784 NA other upstream 415359 2492086 ~ 2494594 (+)
AMCG00002762 NA other upstream 1499865 1406611 ~ 1410088 (+)
G138506 NA other upstream 1507524 1401289 ~ 1402429 (+)
G138476 NA other upstream 1812478 1095939 ~ 1097475 (+)
AMCG00002757 bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 other upstream 1816874 1089278 ~ 1093079 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other downstream 150688 3107458 ~ 3116081 (+)
G138888 grid1,LOC106607602 other downstream 471919 3428689 ~ 3596108 (+)
G138941 NA other downstream 1072754 4029524 ~ 4029924 (+)
G139176 NA other downstream 2139961 5096731 ~ 5098744 (+)
G139492 NA other downstream 3190978 6147748 ~ 6153120 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location