Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002804 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 3170343 ~ 3172461 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| K09220 | IKZF, ZNFN1A; IKAROS family zinc finger protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002804 | True | 1245 | mRNA | 0.66 | 3 | 3170343 | 3172461 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002803 | NA | coding | upstream | 118464 | 3047476 ~ 3051879 (+) |
| AMCG00002801 | cpxm2 | coding | upstream | 213573 | 2909953 ~ 2956770 (+) |
| AMCG00002800 | LOC106512385,LOC106562767 | coding | upstream | 285247 | 2865443 ~ 2885096 (+) |
| AMCG00002794 | LOC108416076,LOC108417123,LOC108417122,LOC107746757 | coding | upstream | 393736 | 2768451 ~ 2776607 (+) |
| AMCG00002796 | NA | coding | upstream | 403370 | 2766758 ~ 2766973 (+) |
| AMCG00002810 | NA | coding | downstream | 22679 | 3195140 ~ 3198501 (+) |
| AMCG00002814 | NA | coding | downstream | 84585 | 3257046 ~ 3267033 (+) |
| AMCG00002816 | LOC106607591 | coding | downstream | 175721 | 3348182 ~ 3348766 (+) |
| AMCG00002815 | LOC107659261 | coding | downstream | 186332 | 3358793 ~ 3376168 (+) |
| AMCG00002821 | NA | coding | downstream | 262682 | 3435143 ~ 3435592 (+) |
| G138719 | NA | non-coding | upstream | 478503 | 2691429 ~ 2691840 (+) |
| G138712 | NA | non-coding | upstream | 502805 | 2665458 ~ 2667538 (+) |
| G138634 | NA | non-coding | upstream | 706707 | 2461638 ~ 2463636 (+) |
| G138593 | NA | non-coding | upstream | 1109739 | 2060377 ~ 2060604 (+) |
| G138562 | NA | non-coding | upstream | 1231218 | 1938147 ~ 1939125 (+) |
| G138816 | NA | non-coding | downstream | 446 | 3172907 ~ 3177610 (+) |
| G138871 | NA | non-coding | downstream | 203785 | 3376246 ~ 3378027 (+) |
| G138903 | NA | non-coding | downstream | 555036 | 3727497 ~ 3727731 (+) |
| G138905 | NA | non-coding | downstream | 752708 | 3925169 ~ 3928654 (+) |
| G138927 | NA | non-coding | downstream | 817463 | 3989924 ~ 3990348 (+) |
| G138790 | bub3,LOC106575478,LOC106577429,LOC107684575 | other | upstream | 54262 | 3107458 ~ 3116081 (+) |
| AMCG00002784 | NA | other | upstream | 675749 | 2492086 ~ 2494594 (+) |
| AMCG00002762 | NA | other | upstream | 1760255 | 1406611 ~ 1410088 (+) |
| G138506 | NA | other | upstream | 1767914 | 1401289 ~ 1402429 (+) |
| G138476 | NA | other | upstream | 2072868 | 1095939 ~ 1097475 (+) |
| G138888 | grid1,LOC106607602 | other | downstream | 256228 | 3428689 ~ 3596108 (+) |
| G138941 | NA | other | downstream | 857063 | 4029524 ~ 4029924 (+) |
| G139176 | NA | other | downstream | 1924270 | 5096731 ~ 5098744 (+) |
| G139492 | NA | other | downstream | 2975287 | 6147748 ~ 6153120 (+) |
| AMCG00002939 | ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 | other | downstream | 3894394 | 7066855 ~ 7073538 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000312_00868747_00873131 | IKZF5 | coding | CI01000312 | null | 868747 ~ 873716 (+) |
