AMCG00002811


Basic Information

Item Value
gene id AMCG00002811
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 3181102 ~ 3191496 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002811
ATGAAGACTGACTGTCGTCTGTGCAACAATAGAAACAGTATAACCGGTTCCTCCACTTCGCATAGCCGCACATCGTCACCGGCAGACTGGCTCCACCTGTCCGGTGAGCTCGCACGGGAGCTGCACCCCTGGGCTCCTGTCTGCGCGGCTGGACGGTCGGAGATGTCGGGCCGGGCGGTGATGCTCCTCGCCTGTCTGCTGTGCTCCGGCTGCGGGATCGTGTCCGCCGattcGTTTGCGGAGCAGACAGCCAGACTGTCCGAATATGATGTGGTCATTCCTAAGGCCATCTTCCACAGGCAGAAACGTCTGGCAAACCAGACCCGGGAGTCCGAGCAGGGACACAACACAGAGACCCTGACCTACTCCGTAAGGATCAAAGGCAAGGATCATCTCCTTCACCTGGAGAAGAACAGaGACTTTCTACCTGAAGATTTTGTGCAGTATTCTTACAATGATAATGGGGAACTGATGACCTCATACCCCAGGGTACAGGAGCACTGTTACTATCATGGTCAAGTGGAGGGACTGGAACACTCGATGGTTGCGCTTAGCACCTGCTCGGGCCTCAGAGGTATCATTCTGATCGGAGAGCAGAGTTATGCGATCGAGCCTGTTGCTGAGTCACCAGCCAATGAGCACCTCCTGTTCCTGCTGGAGCACAGCCAGCATGAGCCCTTTGCGTGTGGAGTGAGCACAGAGATGCCTCCGCCGCTAGAAGAAGACCCCGAGACGCCACGCCAAGCGGAGACGCGCCACTCGGACACTGTGGGGTCCATGACCAGGCTGTTCAGAAAGAAACGCAATCTGCCACAGACCAGATATGTGGAGCTCATACTAGTTGCAGACAAAAGCAGGTATGTATACAAGAATTCTAACGAGACGGCGGTGAACGAGGAGCTGATTCAGATGGCCAACCTGCTGGATGGGTACTATCAGCAGCTAAACATCCGCGTGATCCTGGTGGGGGTGGTGATCTGGAAGACCCAGGACCCCATCAACGTGGACGGCCAAGCCGGACAGGTGCTGGACAGCTTCGTCAAGTGGAGGAAGACATACCTGGTTCCACGCAAGAGGAACGACATGGCCATGCTGTTGGTgggCAGGAATACCAGTTACAATGGCGGTATCCTGGGCATGGCTGTTGTGGGCACGGTGTGTTCCCCGAGCAGCGCTGGGGGCATCAGTGTGTTCATTGCCAACAGCCTACAGTACTACTCCACGGTGGTGGCCCACGAGATGGGGCACAATCTGGGCATGAACCACGACGACAAGATCTGCGACTGCAATGGGAGCTGCATCATGCACGCGTTGGCAGGCGGCTCCACCAAATTCAGCACCTGTAGCAGCAATGACTTCATCAACCTGATCCTGCAGGGCGGAGGCATCTGCCTGAACAACCAGCCCTTGCCATCCGATGTCTTCTCAGAGCCGTCTTGTGGCAACGGCTTGGTGGAGCAGGGCGAACAGTGCGACTGTGGCAAGCCCCAGGATTGCACGAACAAGTGCTGCGATGCGGCCACATGCAAGTTCAGCAAGGGCTCGGCCTGCGCTCAGGGCTTGTGCTGTGAAAACTGCCAGATGAATGTGGCAGGGACCCCCTGCCGGGAGTCTGTCAACCCCTGTGACCTGCCGGAGTTCTGCTTGGGCAACTCACCCTCCTGCCCAATCGACTACTACATCATGGACGGCTTCCCCTGCGCCAACAACACGGCCTACTGCTTTGAGGGTCGCTGCCAGACCTACGACTACCAGTGCCAACAGCTGTTCGGTAACGATGCCGAAAAGGCTGTAGATGCCTGTTTCGTAGACTCCAATACAAGGGGAGATCGGTTTGGGAACTGTGGAAGAAATGGGGCTACGTATATCCAATGTACTCTGGCGAATGTTAAATGTGGGAAGATCCAGTGCAGCAACGTTGACATCACCAAGCTTCCCTACGGGGCGACCATCACTCTGCACTATGTCGGGCAAAACCAGTGTTTCAACGCGGACTTTGACCTGGGAAGTGATGTGGTGGACCCTGCTTACaCTTGCTTTAACTATCAGTGCAGCAACACCTCCGCGCTCAATTACACTTGTGACACTCAGACACAGTGCAATGGCAGAGGAGTGTGTGATAACCTGGGTCACTGTTACTGTAACAACGGCTGGGCCCCCCCCAACTGTGACCGTAGCGGCTCGGGAGGCAGCATAGACAGCGGCCCCACAAAGATCGACACCTCCCTCAGAGACGGTCTGCTCATCTTCTTCCTCCTGGTGGTTCCTGTCCTCATCCTCATCGGCGCCATCCTCTTCTTCGTGTTCAAACGCGGCGGGCTGCAGCGGTGCCGGAGGCGGAAGCGCTCCAGTCAGAACCAGTCACGGGACCCCGCACCAAGAACCTCAACGCCCAGGGCCGCCCCCCAGAGAGCTCAGCCTGCCAGCCGCACTCCTGCACCTGCTGCCCCACCCTCATACAGGCCCCCACCTACCCCCCGAAACGTAAATGGGAATTTTGGGATTCCAGGCTATGAGAATCCTGCCGTGCCCCCCCAAGTCAACCAGCAGGGACCTGGAGTGCCCAGACCCATCCTCCCCACGAAGCCCTGACCTCCAACCTCCGACCTCTCTGCCACACAGCCTGGGACACTTGCACTGGTTATTCAGCCcagggtttgtttttatatttgagGGAAAACTGGAGCCATAACATCAATGTATGGATGTCGGCCATGTTTGATTCCACAATTATACAAGCATTAGTATTGTagcaaaatatatgaataaaataggGAGGTGTCGATATGTGGGCGCTACTGATACACTAGTGCTTATTTGCAAATTGTATGATGTCATTATTGCTGTATGATTTgatttgcaaagctttcaggtatTAATGCAGTGATATTTTACCATTGATGGCACACCCCAAGCAATGGTTGCCTAAACCAGCACCTATGGTTTCTTGGTGGAAATGTTGCAATCCTTCAGATGTAATCTAGAGCTCAGAGATGCTTTTTTCCtcaaattaatgcatttagaTATTTTTAAGGTTACCATTTATCCAGGGTTTAACTCAGTTTGACGAACAGTACTTTAGCATTTAGTATCCACAGACAATCGAGATGCGTTCAGATCAATAGTTGACACGGgagttgatttaatttaatgaataaaccATTCCTAATTGTTTCCACTCTTACAACATAACTTGAATgcctgtacatacacacacagatatactgCGGTTAACTGGAACTGAAATGCtgttatacaatattttttaactcGGGGAAACTTGTTTACAGGGTGTAAAATTTGTActtgtattaataaatgcatacaattatgg

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002811 True 3334 mRNA 0.53 22 3181102 3191496

Neighbor

gene id symbol gene type direction distance location
AMCG00002805 ikzf5,LOC107744272,LOC104955501,LOC107583523 coding downstream 538 3169166 ~ 3180564 (-)
AMCG00002806 acadsb,LOC107746745,LOC102776774 coding downstream 12598 3162801 ~ 3168504 (-)
AMCG00002808 NA coding downstream 40453 3138948 ~ 3140649 (-)
AMCG00002809 NA coding downstream 47216 3124924 ~ 3133886 (-)
AMCG00002807 bub3,LOC106575478 coding downstream 60005 3115861 ~ 3121097 (-)
AMCG00002812 NA coding upstream 7172 3198668 ~ 3206556 (-)
AMCG00002813 NA coding upstream 22129 3213625 ~ 3219238 (-)
AMCG00002818 LOC107660481,LOC107745581,LOC106578991,LOC107598034 coding upstream 78993 3270489 ~ 3293427 (-)
AMCG00002820 plekha1 coding upstream 113069 3304565 ~ 3328956 (-)
AMCG00002817 NA coding upstream 140221 3331717 ~ 3345334 (-)
G138799 NA non-coding downstream 68020 3060561 ~ 3113082 (-)
G138742 NA non-coding downstream 460398 2720412 ~ 2720704 (-)
G138738 NA non-coding downstream 466414 2714377 ~ 2714688 (-)
G138737 NA non-coding downstream 473027 2707869 ~ 2708075 (-)
G138720 NA non-coding downstream 489233 2691430 ~ 2691869 (-)
G138873 NA non-coding upstream 184752 3376248 ~ 3378038 (-)
G138906 NA non-coding upstream 733671 3925167 ~ 3928618 (-)
G138948 NA non-coding upstream 884119 4075615 ~ 4076838 (-)
G139024 NA non-coding upstream 1264296 4455792 ~ 4456002 (-)
G139025 NA non-coding upstream 1274458 4465954 ~ 4466189 (-)
G138741 NA other downstream 461683 2718208 ~ 2719419 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 2255704 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 2359511 805760 ~ 821591 (-)
AMCG00002725 NA other downstream 2991765 184121 ~ 189337 (-)
G138245 NA other downstream 3034262 144926 ~ 146840 (-)
AMCG00002828 NA other upstream 737265 3928761 ~ 3953324 (-)
G138932 NA other upstream 810154 4001650 ~ 4002804 (-)
AMCG00002935 LOC106589936 other upstream 3870977 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 4157315 7348811 ~ 7352821 (-)
AMCG00002970 cj104,anapc16 other upstream 4739670 7931166 ~ 7938241 (-)

Expression


Co-expression Network