AMCG00002814


Basic Information

Item Value
gene id AMCG00002814
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 3257046 ~ 3267033 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002814
ATGATGAGGAAATATAAAGACTTCGGTAAAAACCCAGATCCTGCCCAAGGACTAGTTTACCTGTTGGAAAGTCCCGCAGCCGTCCAGCGGGATGCTGAAGATGGCGTAGGAGCCGTTGTTTTGAGGACGGCAGAACGGGTCATTCACACTGACGTCGCTGATGTTGTAGTCCAGTGCGTGCAGGAAGGACAGCTCCAGGCCGACCCTCATGAGGTCACTAGAGCACTCCACCTGCACTGGAGAAGGTCAAACACGCTTGTGAAGTCCTGTGGGGGGTCCCTGGATGTCCCCTCGGGTTGGTTTTCCACCCCAAACTATCCAGAAGTGTACCCTTCCAATTCTTACTGCGTGTGGCACATCACAGTGCCAGCTTTCGAGAGGATAGAACTGGAATTTGACCAGATACAtgTGCAGACCGATCGAACCCCTGCAGGGGCAGAGCTGGGGCCCAGGCCAGGGCAGGAGGAGAGCTTGGTTCAAAATACGAGACACAGAGGAAAGTCAGACAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002814 True 513 mRNA 0.54 3 3257046 3267033

Neighbor

gene id symbol gene type direction distance location
AMCG00002810 NA coding upstream 58545 3195140 ~ 3198501 (+)
AMCG00002804 NA coding upstream 84585 3170343 ~ 3172461 (+)
AMCG00002803 NA coding upstream 205167 3047476 ~ 3051879 (+)
AMCG00002801 cpxm2 coding upstream 300276 2909953 ~ 2956770 (+)
AMCG00002800 LOC106512385,LOC106562767 coding upstream 371950 2865443 ~ 2885096 (+)
AMCG00002816 LOC106607591 coding downstream 81149 3348182 ~ 3348766 (+)
AMCG00002815 LOC107659261 coding downstream 91760 3358793 ~ 3376168 (+)
AMCG00002821 NA coding downstream 168110 3435143 ~ 3435592 (+)
AMCG00002822 grid1b,grid1,LOC102791605,LOC107598047,LOC107563625 coding downstream 294319 3561352 ~ 3562149 (+)
AMCG00002823 LOC105909129 coding downstream 410609 3677642 ~ 3681292 (+)
G138816 NA non-coding upstream 79436 3172907 ~ 3177610 (+)
G138719 NA non-coding upstream 565206 2691429 ~ 2691840 (+)
G138712 NA non-coding upstream 589508 2665458 ~ 2667538 (+)
G138634 NA non-coding upstream 793410 2461638 ~ 2463636 (+)
G138593 NA non-coding upstream 1196442 2060377 ~ 2060604 (+)
G138871 NA non-coding downstream 109213 3376246 ~ 3378027 (+)
G138903 NA non-coding downstream 460464 3727497 ~ 3727731 (+)
G138905 NA non-coding downstream 658136 3925169 ~ 3928654 (+)
G138927 NA non-coding downstream 722891 3989924 ~ 3990348 (+)
G138940 NA non-coding downstream 757409 4024442 ~ 4024745 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 140965 3107458 ~ 3116081 (+)
AMCG00002784 NA other upstream 762452 2492086 ~ 2494594 (+)
AMCG00002762 NA other upstream 1846958 1406611 ~ 1410088 (+)
G138506 NA other upstream 1854617 1401289 ~ 1402429 (+)
G138476 NA other upstream 2159571 1095939 ~ 1097475 (+)
G138888 grid1,LOC106607602 other downstream 161656 3428689 ~ 3596108 (+)
G138941 NA other downstream 762491 4029524 ~ 4029924 (+)
G139176 NA other downstream 1829698 5096731 ~ 5098744 (+)
G139492 NA other downstream 2880715 6147748 ~ 6153120 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 3799822 7066855 ~ 7073538 (+)

Expression


Co-expression Network