Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002829 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 3977656 ~ 3979035 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007275 | multicellular organism development | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0046983 | protein dimerization activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002829 | True | 1380 | mRNA | 0.68 | 1 | 3977656 | 3979035 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002824 | grid1,LOC107375932,LOC106530676 | coding | downstream | 310459 | 3665449 ~ 3667197 (-) |
| AMCG00002819 | NA | coding | downstream | 598358 | 3378606 ~ 3379298 (-) |
| AMCG00002817 | NA | coding | downstream | 632322 | 3331717 ~ 3345334 (-) |
| AMCG00002820 | plekha1 | coding | downstream | 648700 | 3304565 ~ 3328956 (-) |
| AMCG00002818 | LOC107660481,LOC107745581,LOC106578991,LOC107598034 | coding | downstream | 684229 | 3270489 ~ 3293427 (-) |
| AMCG00002830 | NA | coding | upstream | 1784 | 3980819 ~ 3980998 (-) |
| AMCG00002837 | NA | coding | upstream | 29620 | 4008655 ~ 4016581 (-) |
| AMCG00002836 | NA | coding | upstream | 43546 | 4022581 ~ 4029995 (-) |
| AMCG00002838 | NA | coding | upstream | 55335 | 4034370 ~ 4035880 (-) |
| AMCG00002841 | nkx6.2,nkx6-2,LOC106576777,LOC106605004,LOC107745024 | coding | upstream | 240141 | 4219176 ~ 4221061 (-) |
| G138906 | NA | non-coding | downstream | 49038 | 3925167 ~ 3928618 (-) |
| G138873 | NA | non-coding | downstream | 599618 | 3376248 ~ 3378038 (-) |
| G138799 | NA | non-coding | downstream | 864574 | 3060561 ~ 3113082 (-) |
| G138742 | NA | non-coding | downstream | 1256952 | 2720412 ~ 2720704 (-) |
| G138738 | NA | non-coding | downstream | 1262968 | 2714377 ~ 2714688 (-) |
| G138948 | NA | non-coding | upstream | 96580 | 4075615 ~ 4076838 (-) |
| G139024 | NA | non-coding | upstream | 476757 | 4455792 ~ 4456002 (-) |
| G139025 | NA | non-coding | upstream | 486919 | 4465954 ~ 4466189 (-) |
| G139026 | NA | non-coding | upstream | 497429 | 4476464 ~ 4476663 (-) |
| G139027 | LOC106576780,LOC103360772 | non-coding | upstream | 515993 | 4495028 ~ 4495418 (-) |
| AMCG00002828 | NA | other | downstream | 24332 | 3928761 ~ 3953324 (-) |
| G138741 | NA | other | downstream | 1258237 | 2718208 ~ 2719419 (-) |
| AMCG00002752 | p4ha1,LOC107753313,LOC106578992 | other | downstream | 3052258 | 920788 ~ 925398 (-) |
| AMCG00002743 | psap | other | downstream | 3156065 | 805760 ~ 821591 (-) |
| AMCG00002725 | NA | other | downstream | 3788319 | 184121 ~ 189337 (-) |
| G138932 | NA | other | upstream | 22615 | 4001650 ~ 4002804 (-) |
| AMCG00002935 | LOC106589936 | other | upstream | 3083438 | 7062473 ~ 7066350 (-) |
| AMCG00002945 | NA | other | upstream | 3369776 | 7348811 ~ 7352821 (-) |
| AMCG00002970 | cj104,anapc16 | other | upstream | 3952131 | 7931166 ~ 7938241 (-) |
| G139933 | LOC108443181 | other | upstream | 4506326 | 8485361 ~ 8494596 (-) |
