Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002838 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 4034370 ~ 4035880 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002838 | True | 675 | mRNA | 0.63 | 6 | 4034370 | 4035880 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002836 | NA | coding | downstream | 4375 | 4022581 ~ 4029995 (-) |
| AMCG00002837 | NA | coding | downstream | 17789 | 4008655 ~ 4016581 (-) |
| AMCG00002830 | NA | coding | downstream | 53372 | 3980819 ~ 3980998 (-) |
| AMCG00002829 | NA | coding | downstream | 55335 | 3977656 ~ 3979035 (-) |
| AMCG00002824 | grid1,LOC107375932,LOC106530676 | coding | downstream | 367173 | 3665449 ~ 3667197 (-) |
| AMCG00002841 | nkx6.2,nkx6-2,LOC106576777,LOC106605004,LOC107745024 | coding | upstream | 183296 | 4219176 ~ 4221061 (-) |
| AMCG00002844 | NA | coding | upstream | 246882 | 4282762 ~ 4298336 (-) |
| AMCG00002843 | NA | coding | upstream | 270446 | 4306326 ~ 4336926 (-) |
| AMCG00002851 | NA | coding | upstream | 546702 | 4582582 ~ 4600633 (-) |
| AMCG00002854 | NA | coding | upstream | 642827 | 4678707 ~ 4714306 (-) |
| G138906 | NA | non-coding | downstream | 105752 | 3925167 ~ 3928618 (-) |
| G138873 | NA | non-coding | downstream | 656332 | 3376248 ~ 3378038 (-) |
| G138799 | NA | non-coding | downstream | 921288 | 3060561 ~ 3113082 (-) |
| G138742 | NA | non-coding | downstream | 1313666 | 2720412 ~ 2720704 (-) |
| G138738 | NA | non-coding | downstream | 1319682 | 2714377 ~ 2714688 (-) |
| G138948 | NA | non-coding | upstream | 39735 | 4075615 ~ 4076838 (-) |
| G139024 | NA | non-coding | upstream | 419912 | 4455792 ~ 4456002 (-) |
| G139025 | NA | non-coding | upstream | 430074 | 4465954 ~ 4466189 (-) |
| G139026 | NA | non-coding | upstream | 440584 | 4476464 ~ 4476663 (-) |
| G139027 | LOC106576780,LOC103360772 | non-coding | upstream | 459148 | 4495028 ~ 4495418 (-) |
| G138932 | NA | other | downstream | 31566 | 4001650 ~ 4002804 (-) |
| AMCG00002828 | NA | other | downstream | 81046 | 3928761 ~ 3953324 (-) |
| G138741 | NA | other | downstream | 1314951 | 2718208 ~ 2719419 (-) |
| AMCG00002752 | p4ha1,LOC107753313,LOC106578992 | other | downstream | 3108972 | 920788 ~ 925398 (-) |
| AMCG00002743 | psap | other | downstream | 3212779 | 805760 ~ 821591 (-) |
| AMCG00002935 | LOC106589936 | other | upstream | 3026593 | 7062473 ~ 7066350 (-) |
| AMCG00002945 | NA | other | upstream | 3312931 | 7348811 ~ 7352821 (-) |
| AMCG00002970 | cj104,anapc16 | other | upstream | 3895286 | 7931166 ~ 7938241 (-) |
| G139933 | LOC108443181 | other | upstream | 4449481 | 8485361 ~ 8494596 (-) |
| G140006 | NA | other | upstream | 4811152 | 8847032 ~ 8847840 (-) |
