AMCG00002863 (LOC104965006)


Basic Information

Item Value
gene id AMCG00002863
gene name LOC104965006
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 4908501 ~ 4918521 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002863
GTTTTATTACTCGGTGTGTCTGCAGACTGGTCGGCAATGTCTTCCCAAAACACCTCCATGGCCAACAAGAAAGATGACAAGGGGAGAAACATTCAGGTTGTGGTCCGATGCAGACCCTTTAACACCGTGGAGCGCAAGTCCGCGTCGCACGCCGTGGTGGACTGTGACGCGGCCCGCAAGGAGTTGCTGGTGCGGACCGGTGTTGTAGGGGATAAATCGGCCAGGAAAACTTATACTTTTGACATGGTCTTCGGTCCCTCTGCCAAGCAAATAGAGGTGTACAGGAGTGTGGTTTGTCCAATTTTGGATGAAGTTATAATGGGATATAACTGTACAGTGTTTGCGTATGGACAGACTGGGACAGGCAAAACGTTCACGATGGAAGGAGAGAGGTCACCCAATGAAGAATTTACGTGGGAAGAGGACCCTCTGGCTGGCATTATTCCTCGCACGCTCCATCAGATCTTCGAGAAGCTGACCAACAACGGGACAGAGTTCTCCGTCAGGGTGTCTTTGTTGGAAATCTACAACGAGGAGCTGTTTGATCTGCTCAGTCCCTCTCCCGATGTGACCGAAAGGCTGCAGATGTTTGATGACCCACGAAATAAGAGGGGAGTCATTATTAAAGGGCTGGAAGAGATCACTGTGCACAACAAAGATGAGGTCTACCAGATCTTGGAAAGAGGCGCTGCAAAGAGAAAGACTGCTTCCACCCTGATGAATGCCTACTCCAGTCGTTCGCACTCTGTTTTCTCCGTAACGATCCACATGAAAGAGACCACGGTCGATGGAGAAGAGCTCGTCAAGATTGGAAAACTGAACTTGGTGGACCTCGCTGGCAGTGAGAACATCGGGCGCTCCGGGGCGGTCGACAAGCGTGCCCGGGAGGCCGGCAACATCAACCAGTCCCTGCTGACGCTGGGCAGGGTGATCACGGCCCTCGTGGAGAGGACGCCTCACATACCGTACCGCGAGTCCAAGCTCACTCGCATCCTGCAGGACTCTCTGGGCGGGAGGACCAAGACCTCGATCATCGCCACCGTCTCGCCGGCGTCTGTCAATCTCGAGGAAACCTTAAGCACACTGGACTATGCCAACCGGGCAAAGAACATCTTGAACAAGCCTGAAGTCAACCAGAAACTTACCAAGAGAGCTCTCATCAAGGAATACACTGAAGAGATCGAACGTCTCAAACGGGATCTGGCTGCCTCTCGAGAGAAGAATGGAGTGTACCTCTCTGCTGAAAACTATGACTCTATGAACAGCAAAATAGTGTCTCAAGAAGAGCAGATTACTGAGTACATGGACAAGATCTCTGCTATGGAAGAAGAGCTGAAAAGAGTGTCCGAGATGTTTTCGGAGAGCAAGAAGGAGCTAGAGAACTGTGCGGTGGATCTGCAGGAGAAGAAGCAGCTGCTGGAGGAGACGCACAACAACCTCCAAGACACCAAGCTGAAGCTGTCCGAGGAGGCGTTCATAGTTTCTGAGCTGGAGTCGACCGAACAAGAGCTCTACGGGACTGCGGACAAGttATTGGCTACAGTGGATGTCAGTACCAAAGATGTGTCTGGGTTACATGCCAAACTGGATAGGAAGAAGGAAGTTGAACAGCATAATGCCAAAATGCAAGACACCTTTGCTAATCGGATGGACAGCTTGTTTAATCAAATGGAGAAGTCGGTCGACGAACAAAatGACCTGCTACATGCCAACGCTGCCGTCTTCAGTGACACGATGTCAACGGTCGCCGTGTCTTTCAAGAGCATCAAAGATCTCGTCAATGCCGGAGTGGTGAAGTGTCTCGGCAAGATGCTGGAACAGGAAACTCTGTCTCAGGAAACCAAAAGCAGCCTCCAAAATGTGATGGAGGAACACAGATCTGAACTGGAGGAAGTGCTCCTGGGGCAGATCTTGCCAGGAATCCACGCTGTAATGGAAATGAACGAAAGTTTAAAGCAAACTATTCAGAGCCACTCTGTCTTGGCGGAAAAGATGGAGGGCATGAAACGTGAGATGAGCTCCTTCTTCTGCGGCCACAGGCAGGCCCTCACCAGGgGTATGTCCCAGGTCATCCTATGTTTGCAGAATCAGTTGAATCTGTTGTCTGTGGAGACTCAAAAGAACTTTGATAGTCTGCTGAGCAAATCAGCTTCGCTGCAGGCTTCGATGGGAACCCTTCAACAGAGCGTGGAAGTCCAGTGCGCCGATGCAGCAGAGAATGTAGCTTCTCGGCAAGAGGAGTTCGAGGCCTCCGTTGACGGCCTGATTGCAGAGGTCAGGCAGGTGGCGGCCGAGGCGGAGCACCTGGTGGAGGAGTCGTCCGGGCACTGTGGATACCTGAAGGCGGGACTGACCCGGCTGGGAGAGAGCTCGCTTCAGCGGTGTGAAACAACTGTGGCCAGCATTAATTCCTTCACTGATGGCCAGTCTTCCCTGATCTCTGAGACCAAGTCTTTGATCGAGTCTTCTCAGCAGATTGTGCAAGAGAGCTGCGACTCGCGCACCCAGGAGGTGAGCGGGCAGCTGAAGCAGCAGCAGGACGCCGCCCAGAGAGCCCTGACCGCCCTGGCGGAGCAAACCCGCCGAGACCAGGACACCCTGCTGCAGCACAAGACTGTCCTGCTCGACCACACGCAGGAGGGCCTGGGCAACGTGTTCAAGTTCTTGCAGGAGGAGCTCAGACAGGATGTGCCAACAGGTACAACTCCGCAGCGCAAGGATTACGTCTACCCCCGAGTGCTCTCTAAATCCAGGCCGAGAGACGAATTGCTGACTCGGTTCAGAAAGcagcaggaggagctggaggaacTTGCGTACACCTGCGAGCCCGTCCAAGAGGAGCCGGTCGAACAGGACTCTCTGGAAGATGATGTCATAAGCAGCTACAACGACAGCGTCAGCGAGCGGTCGGGGGTTGACGACAGCATCATGTGCTACGAGAACGGCAGGGCCCCCTTCTTCAAGCGCAAGAGAGGccagaagaaggaaaacaagCCAGCGAGCGTCCTCGACAAATCCAAGCTTTCTGAATCCCAAACCGATCAAATGTCTCTGCGGTCCAAGCTGCCTCTCCGAGCACAAAACTGAGCCGCGGGTGGCTCGGTGCGTGCAGTTCGGTTTTGATTGGGAGGGGgtgggacatttttttttaaacagttatttaatattgtattctgCTGGTTTCTTGGttcgttttcatttttctgttcctttccATGTCACATTTGTGGGTTTAAGTTAAGCACTGTCTATTCGCTTATTAACCtctacactttttttaaatgtaactttgccttctgtactgtatataaaaatctAAACGGGCACTTTTTCACCAGCACAATTATGTTTGCCTTCTGTCCGATGAAGTCTTCGTATGCGGGGGGGATGGGGGACTTTCAGAGTAATAAAACAACTCCAGTATTCAGTGTTTTGTGGTATTTTTGTAATGCCATCACCTCAATGTAATGAATTAAATGTCttgtcttttaattaaaagcctTGTGCTTATATGCTGATTTCTTCACCACCATGATTTTATCTTTATTGTCGAGTTGGTATTCCGTAAATGGCAACTCCTGCAAAATACA

Function

NR:

description
PREDICTED: kinesin-like protein KIF11

GO:

id name namespace
GO:0044430 obsolete cytoskeletal part cellular_component
GO:0015630 microtubule cytoskeleton cellular_component
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K10398 KIF11, EG5; kinesin family member 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002863 True 3590 mRNA 0.51 22 4908501 4918521

Neighbor

gene id symbol gene type direction distance location
AMCG00002857 march5,LOC107586100,LOC107549154,LOC107676368 coding upstream 31165 4874883 ~ 4877336 (+)
AMCG00002861 march5,LOC107549154 coding upstream 40930 4850790 ~ 4867571 (+)
AMCG00002858 btaf1,LOC107679172,LOC106604898 coding upstream 112197 4775371 ~ 4796304 (+)
AMCG00002852 LOC107562385,LOC104957417 coding upstream 140825 4763141 ~ 4767676 (+)
AMCG00002853 NA coding upstream 160360 4734674 ~ 4748141 (+)
AMCG00002862 NA coding downstream 9909 4928430 ~ 4933205 (+)
AMCG00002864 NA coding downstream 33579 4952100 ~ 4952405 (+)
AMCG00002866 exoc6,LOC107695547,LOC107654070 coding downstream 45436 4963957 ~ 5008745 (+)
AMCG00002867 LOC108412396,LOC103044660,LOC104928862,LOC105891210 coding downstream 93658 5012179 ~ 5024583 (+)
AMCG00002868 jmjd1c,LOC108412835 coding downstream 234783 5153304 ~ 5187446 (+)
G139084 cpeb3 non-coding upstream 106257 4798613 ~ 4802244 (+)
G139044 NA non-coding upstream 195676 4626657 ~ 4712825 (+)
G139038 NA non-coding upstream 324334 4583865 ~ 4584167 (+)
G138946 NA non-coding upstream 831713 4072281 ~ 4076788 (+)
G138940 NA non-coding upstream 883756 4024442 ~ 4024745 (+)
G139170 NA non-coding downstream 148951 5067472 ~ 5068895 (+)
G139205 NA non-coding downstream 320829 5239350 ~ 5239490 (+)
G139238 NA non-coding downstream 447914 5366435 ~ 5366683 (+)
G139263 cdk1,LOC106607826,LOC100136692 non-coding downstream 521256 5439777 ~ 5442279 (+)
G139351 NA non-coding downstream 899531 5818052 ~ 5819125 (+)
G138941 NA other upstream 878577 4029524 ~ 4029924 (+)
G138888 grid1,LOC106607602 other upstream 1312393 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 1792420 3107458 ~ 3116081 (+)
AMCG00002784 NA other upstream 2413907 2492086 ~ 2494594 (+)
AMCG00002762 NA other upstream 3498413 1406611 ~ 1410088 (+)
G139176 NA other downstream 178210 5096731 ~ 5098744 (+)
G139492 NA other downstream 1229227 6147748 ~ 6153120 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 2148334 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 2458166 7376687 ~ 7379487 (+)
AMCG00002960 NA other downstream 2990731 7909252 ~ 7920908 (+)

Expression


Co-expression Network