AMCG00002875


Basic Information

Item Value
gene id AMCG00002875
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 5262750 ~ 5276075 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002875
ATGTATGACGTCCCCAGCGTGCAGGCCTTCAGTGAAATGCAGCAAAAGTTATACGAAGGAAAGAACCCCCTTTGCAAAGAGGCCCCAGAGCCACGCAGTGCCCCATCACAGCTGCCTTTCCGGTGCCCGCGGTGTGGTGAACACGAGAGGTTCAGAAGCCTGTACTCGCTGAGGGCTCACCTGGAGTATGGGCACAGCTACCAGACCATGCACAACACCAGCTCAGCCTCTCCAGGGTCCACCGAGAACGTCCTGCTGGACAACAAGGAGTCCACAGACACAGGCTGCGGGGAGAAATGCAAAGGCTCAGCGGTGGACAATGCTGGAAAAAGGAATGTCAGGTTTAAGGACGGCAGAGAGACGGCCAACTCCCCCAGCCCCTGCGAGGAGTCGAACCCAGAGCCCCACGGCAGCGGGGGCAGCTCCGAGGGCCAGAGCAGCGGCCCGGCGTCCACGGTGTCCATCGAGGCCCACGTGCGGCGCCGGCTGGAGGAGATGCTGCAGGCGGCGGACAGCAGCATGGAGAGGCGTCTGCGCAGGGTGAGCAGCGAGCTGGCGCACACGGACTCGGAGCTGCTGCGCACGCAGGCCCAGTCCCGGCACCTGGCCCAGGAGCGGCAGGAGCTGTTCGAGCGGGAGAGGGCCCTGAGCCGCCAGGTGGACGCGGCCGTCACAGTCATTGCAGCCCTCCGGCAGCAGCTGACCGAGGAAGTAATCAGCATTCATCACTTTCTGGAAGCGGCCGTTCATCATGAAGTCTGTGGGAAAGTTCGACTCCAGCACTTCATAGAGAATCTCTTGCGACGGATAGCCCTGGCAGAGAAGCTCTTGGAGTATTATCAATGTGCTTCCAGTCGGCCCAACTGCAGAACACACACTGTTGCTGTCATACCGTCACAGGTCCTGAATTAG

Function

GO: NA

KEGG:

id description
K16737 ZNF365, Su48; protein ZNF365

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002875 True 912 mRNA 0.61 4 5262750 5276075

Neighbor

gene id symbol gene type direction distance location
AMCG00002873 NA coding downstream 21244 5240760 ~ 5241506 (-)
AMCG00002874 NA coding downstream 66057 5190120 ~ 5196693 (-)
AMCG00002870 reep3 coding downstream 172348 5068445 ~ 5090402 (-)
AMCG00002869 NA coding downstream 202202 5054132 ~ 5060548 (-)
AMCG00002865 ide coding downstream 356548 4879277 ~ 4906202 (-)
AMCG00002876 NA coding upstream 13605 5289680 ~ 5297202 (-)
AMCG00002879 arid5b,LOC106577140,LOC102237181,LOC102783177 coding upstream 28836 5304911 ~ 5315169 (-)
AMCG00002878 arid5b coding upstream 71368 5347443 ~ 5354987 (-)
AMCG00002877 NA coding upstream 90740 5366815 ~ 5379558 (-)
AMCG00002883 cdk1,LOC106607826,LOC107671106 coding upstream 162305 5438380 ~ 5443809 (-)
G139039 NA non-coding downstream 678578 4583865 ~ 4584172 (-)
G139029 NA non-coding downstream 751443 4507504 ~ 4511307 (-)
G139028 NA non-coding downstream 766388 4496162 ~ 4496362 (-)
G139027 LOC106576780,LOC103360772 non-coding downstream 767332 4495028 ~ 4495418 (-)
G139026 NA non-coding downstream 786087 4476464 ~ 4476663 (-)
G139249 NA non-coding upstream 120264 5396339 ~ 5396559 (-)
G139496 NA non-coding upstream 881668 6157743 ~ 6158763 (-)
G139593 LOC100846954,LOC107575789 non-coding upstream 1206192 6482267 ~ 6510125 (-)
G139639 NA non-coding upstream 1725590 7001665 ~ 7073536 (-)
G139668 NA non-coding upstream 1942794 7218869 ~ 7219192 (-)
G138932 NA other downstream 1259946 4001650 ~ 4002804 (-)
AMCG00002828 NA other downstream 1309426 3928761 ~ 3953324 (-)
G138741 NA other downstream 2543331 2718208 ~ 2719419 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 4337352 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 4441159 805760 ~ 821591 (-)
AMCG00002935 LOC106589936 other upstream 1786398 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 2072736 7348811 ~ 7352821 (-)
AMCG00002970 cj104,anapc16 other upstream 2655091 7931166 ~ 7938241 (-)
G139933 LOC108443181 other upstream 3209286 8485361 ~ 8494596 (-)
G140006 NA other upstream 3570957 8847032 ~ 8847840 (-)

Expression


Co-expression Network