AMCG00002904


Basic Information

Item Value
gene id AMCG00002904
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 6020258 ~ 6038908 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002904
GCGCGGGTGCAGCGTCGCCATTGGacgattttaaaaataagaccgCGACAGTTTGAGAAGGAGTGATTTCTTTTAGATGAGTGTTTTTCGGAGCATATTTTCACGACCAtCATGATGGAGTCGTGTTTCAATAATCAAACTGATGACAGCATGGACCCTTTGAGTTTAGAAGGGGTGAAGAAAGATCTCTCTGAAGAATTTCTGTCCATGTCAGTATTGTCCCAGgATCCTAGCTTGCAAGAGAAAGAACACCTGCATGTTTACTTGCGTATAAGGCCATTCACTGCAGCAGAAAAAGACAATGATGAATCGCAGGAGTGTGTTACCATTGAAAACTCAGATACTGTATTACTGAAGGCTCCGAGAAGTTCTCTGTCAGCCAGGCTCAGTGATAAATCTCTTCAGCAGACTGCCCAGCGATTTCAGTTCTCTAAGgTTTATGGTCCACAAATGACACAGAAGGACATATTCAACGGCACCGTCAAGCCTCTCGTTAAAGATGTTCTCGAAGGAGGAAACTCTCTTGTGTTTACATACGGAGTAACCAATGCTGGGAAGACCTTCACCTTTCTAGGTCCTGACAATGATACGGGTATCCTGCCAAGGTCACTGAACATGATATTCAACAACATTCAAGACAAGATCTACACACAGATGGACATCAAGCCACACAGATGTAGAGAATACACCAGACTTACCAAAGACCAGCAGGTGGAAGAACATGCGAGTAAAAAAGCCATCCTTCGATTCACAAAAGAGAATGATTCTCAGAAAAGCACGAGTATCCAATCAAATTCAGACAACAGGTCTAACCTACTTGAAggcaagtatttattttgggtATggaCTACTATTAATGGTCTAGATGTAGATGAATCCCTAGACTCTGAAAGCTTCACTCTAAACCTCGGTGATCACACCAAATTCTCCATATGGGTGTCATTTTGCGAGATCTATAATGAAAGCATTTATGACTTGCTGGAGAGCATACCCACTGGTTCACTGAGGAGAAATACGCTGAGGCTTGCACAAGATGTCAAAGGACACACCTATGTGAAAGATCTCAAATGGGTACAAGTTAATGATGCAGACGAAGCATATAAAGTTCTGAAGctgggaaaaaaacaccagaGCTTTTCCTGTACAAAACTCAATCACCTATCGAGCCGGAGtCACAGCATATTCTCCATTCGGATCATACGCATTGAAGATGTTGGAATACCGCGTGTGCAAAAAATCAGCGAGCTGTCTTTGTGTGATCTTGCTGGATCCGAGCGATGTGCCAAGACGCAGAATAAGGGAGACCGTTTAAAGGAAGCTGGGAACATCAATACCTCCCTGTTGATTCTTGGAAAATGTCTCACTGCTTTGAGATATAACCAGCAGGCAAAGCTGCCTCAGCATGTGCCCTTCAGGGAGAGCAAACTGACTCATTACCTTCAAGGATTTTTCTGCGGCAGAGGAAGAGCTTGTATGATTGTGAACATTAATCAGTGTGCTTCCATGTTTGACGAAACACTGAACGTGCTGAAGTTTTCTGCACTCGCTCAGAAGGTGGTGGTCCTCACTACAACAAAGCCCCCTTCAGTTGCAAAGAAATCTGCTCGAGAGGtgtctttcattattaataacgCAGACCGTAAGCACtggcgaaagagagagagctccTTTATTAGTTGGGATACAAGTCTGGAAGATGTGCaggaagatgatgatgatgatgaggaggatGAAAGTATGGAAGAAACCATTCAGGATGAGGATGAAGAAGATGCAATACAAGTCAATAAAGAATTGTATGAGAAACAAATCACCCTGATCGAAGATTTGAAAAATAAGGTCCTTGAAGAAAAAGCGGACAAACTCTTGCTGGAATCAAGAATTCGCGAAGAGGTTTCGAAGGAGTTCACAGAGTTGTTCTCACAAATGGAAAGTGATTTCAGTGAACGTcttgagaaagaaaaggagatcATTGAGGAGAGAGCTGAGAGGCGGATGGAAATCTTCCGAAATTTAGTACGCCAGAAGCCGGATGAAGAAGCTGCTGGTGGCAATGAAGCTAGGCTGAGTTCGGAACACAAACTTGTCATGCTGGATGGAATGGTTGATGCTATGCAAGATGACCTTGCTGGGATCAAGAAAGATGCACAAGCTGCACAAGATTGTCTTGTTAGTTTAACTGATCCCAAAGAAACTATTACAAGCCTTGAGAACCAGCTGTCTAATCTATCGGAAGATCTGAAAAAAACTCAAGAACTACTTACATTGAAAACTACAgAATGTGAAACCGCCATTCGCAATCAAATGGAGGAAAATGGCCAACTTATTGCAGCCAGAACGAAACTCGAGTCACAGAATGAAAAGCTCCAGTGTCTTATGGAGTTCTGTCAAGAAAAGGATGACATGATTTCTAAACTGCAAAATGAGTTGGACCACTGGGAAGAAACGGCTACGAAGGACaagACTATGATTGAAGCTATCAAAGGAGAAATCTTGCACTTAAAAACGAATTGTACTTGCTCAAGTGGAAACGACCGTGATGCTCACCGAGACAGCAGGAAAAGAGGTGGCGACATCCAGCAGAACCTTGAGGGACAGCCGCCACTCAAGAAAGgTGCAAATGATGAGGAAAGGGACTGCATCATGATACCAAAAAAGGATGAACTGCAAGCAgaacttaataaaaaacatttggagGTAGTGGAATTGAAGGAAAATGTAGAACATTTACAGCAGGAGTTAAAATCTGTCGCCACAAATTTCCAGAATGAAATCCGACTGAAAGATGAGCTAATTGGTCAAATTAAAGAGGCGCTTTCTTCCTCGGAAAGAAAAGTCAAGGAGCTGAGTGATGAACTTAAACAACAGGCCCTTTCCtatgaaaatactttaaagGCTCTGGAGGATCACAGCaaagaaaaccagaagaccgttgaacaaaatgaaaagctggTAAAGGAAATGAGTCGCCTTCAGAAAGATGCGGAGGAAAATGCTCTCAAGATTAAACAAGTGGAGGATGCACTCAACAAAGAAAGGGAACAAGTAGAAAAGGCTTCTGCTGAATTAAAAGCCACTAAAGACCTCTTGATGAAACATGAAGCAGATTCCCAGGAGACGTCCCAAATGATTGGCACCTTAAGAAATCGGGTGGAGCTCCTTACACAGCAACTGGAAGAGTCCCAAGACTTGGCAGCAAAGAGGGACAGCAGCCACTTCCATGAAACCATTGAGTCCTTGCACAAAGAGTGTGAGAAGGTGGTTAAAGAGTCAGCACAGAAAAGTCAGCAGATTCTTCATCTGGAGCAGGAAATCAACAGTTTGAAACAGCAGATGGCTGAACAAAAGGAGCTATCTACCCAGCTGACACAAGAGCTCAGCGGATTGCAAAGTGCTTGTAGTGAATTAATGGAAAAAGAGACCCTTATTAaccagctgagagagagactaGAAACCCTTTCAAAAGATCTTGAATCCGAAAGACAGGTAGTTACCGAAAAGAAGAAGGTGCAGTCCAACCTAGAGAACGAGGTTGTTCATCTCAaaggaataattaaaaactttgaaGAGCAGGGACAAATTTCTAAGTCAAGTTTTGACAAGGTAGTGGAGTTAGAGCAGCAGCTGGCAGGGAAAGAGTCCTTAATGGAAAATCTGCAAAACTGTTTAAAGGAAACTCAATGCAAGCTCGAAGATTTGGAGTCCAACTCATCCCTTCAGGAAGCCAAGCTGTCTGAGGCGGAGCAAAGCCTCAAAACGGCCAATGAAACGATTGCTGGAAAGGATGCAGAACTGAAAAACCAGAAACTGGAGTTGCTAAGactGAAGGAGCAAGTCAATGATGGTTTGCAAAAAATCCAGAGTTTGAGCCTtgattttcaaagaaaagaGGAGGATGCCTCTGATTTGAAAGAGAAGCTGGTTGATTCAAAAAAGCAAATCCAACAAGTACAAAGAGAGATTTCATCAATGCGTGAAGAGGAGAGAATCcttaaacaaaaattaaatgatttggaGAAAGTAAAAAACCAAATGATTAAGGATTTGAGTAGCAAAGACCGGACAATTCACCAATTAAAGAGCGAACAGTCTAACAGACTGAAGTCGGATGAGAGTGTGCAGCTGTACCAAAAGACACTCAAagATCTGCAAGCTAAAGACCAAGTGATTGAGGACATGCGGCTCGCCCTGACTGAGCAGGAGGAGACTCAAGTGGAGCAAGATCGCGTTCTTGAGGCTAAATTGGAGGAAATTGAAGCTCTAACTGCagaaaagcaaatgttGAAGCAGAAACTTCTAAACCCAACGATGGGCACGGTCAAAGAAGATCAAATGATGGAAGAAAGCATAAACGGTCAATCTGAACGTGCTCGGCGAGAAGTGGATAACTTGAAAGAAATCTTGAAGCTTTCTGAGGAGAAGCATCAAGCTGACAGAAGGAAGTGGCAGGAAGAGAGATTAACGCTGATAAAACAGGCAAAAGAGGCTGAGGTGCGAAGACACAATGATATGAAGAAATATGCTGAAGACCGTGAGCGCCATTCCAAGATGCAAACAGAAGTGGAAAACCTAACAAAGCAACTCTCTGAGAAGGACGGCGATCTTCagaaatggagaaaagaaaGGGATGACTTGGTAGCAGCTCTGGAAGTCCAGCTCAAGAGTCTTCGGACTGCTAATCTACAGAAAGACAAAGAATTGGAGAACCTCAGACAAGATCTCAATGCTCGGCCACGTGAGGGCATTGGGAACAACCAATCTGTTCTGGACTCTTCTGGGATCTCCACGGAAAATGGAAGAACCAGCAGATTTCCCAAACCTGAGCTCGAGATTCAGTTCACGCCTCTTCGGCCCAATAAAATGGAAGTCAAAATGCAAGGCGAGGCTTCTCCAGTAACCATCAAAATACCAAGAACAAGGAAGAGGAAAAgcaatgaaatggaaaagGACTTCGTGGAGAGTGAGAACAGGATGAACATCCGATCCAGAACCGCATCCAGGAACATAAAAGAGCAGTCACCAGCATCCTTAAGGAGGCAGGCGTCGCGTACGAGCCTAAAGTCAGAGAACCGAAAAAAAGATGGACCTTTGCAGAAGATTGGAGACTTTATCCAGAGCTCTCCGAATCTTCTACAAAGCAAAGCAAAAAAATTCATTGGATCCCTCAATGCTAAATCTCCAGAACCACTGAATGGCAAAGGAATTGACTCCAAGCCAAAGAAATCCAAAAGAAAActgtataaaactgaaatttctTCTCCTTTAGACATCCCTTCTCATCCAATTGTCGGTCTGGATCAAGATGAGAAAGAAAGCGATCATCTCATTATCAAAAGAAGACTACGATCAAGAACGGCAAGAAGATGATGTGACCTTTAACCAcagtgcactttttttttttatcaaatgttttgtatattttgattttactGTACTTAAATTTTAGTATTTAGAATTCTCTACCCTAAATACTGGGctgctttttgtttggtttgttttacaaATCATAGGGAtcaggatttttgtttttgtgggcCACATAAGATCAGGAAAGATGCCTTTAAAACattgattaaaaatgtttcatatataatgtttatacattttttttaatttgaaatcttgAATTTGCGCCCATAATAGATTAAGCTGAAAAGAAGATtaagcaactttttttttcttgttagtatttttctgtcaaataaattatttcaaaatgtgaattgattttagttttagttcaATAGATTTGGAATATATTAACTATTTTTAATGAGAAGTAGTTGAAGCTTTGTTTATGGACTGTGGAATTTAAGGACCTCAGAGAAGAGAAGACGGAGCAAAAGCTTTGGATCAGTGCTGTATGGTCAGTGATCTATTAGTCGTTTGGGATCCTGCGTTTCCTGGAGCAATTGACCGTTTTATTCGCAGTGACTGGATGTACATAATTTGGGGATAATTGCATTGGAACTATGTACCCTTTGTAAAATTATACCAGCGAATAAATGGAACTGTTAAAAGTC

Function

GO: NA

KEGG:

id description
K10402 KIF20; kinesin family member 20

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002904 True 6023 mRNA 0.42 32 6020258 6038908

Neighbor

gene id symbol gene type direction distance location
AMCG00002903 NA coding upstream 4013 6011828 ~ 6016245 (+)
AMCG00002900 NA coding upstream 106735 5908977 ~ 5913523 (+)
AMCG00002897 NA coding upstream 141234 5858274 ~ 5879024 (+)
AMCG00002895 LOC106577152 coding upstream 168387 5850528 ~ 5851871 (+)
AMCG00002896 NA coding upstream 202572 5779744 ~ 5817686 (+)
AMCG00002911 NA coding downstream 47652 6086560 ~ 6092066 (+)
AMCG00002908 LOC107553481,LOC107753437,LOC107669213,LOC107683711,LOC108413682,LOC107715956,LOC105902286 coding downstream 55197 6094105 ~ 6110512 (+)
AMCG00002910 NA coding downstream 78821 6117729 ~ 6132219 (+)
AMCG00002909 NA coding downstream 118865 6157773 ~ 6158567 (+)
AMCG00002916 acta2,LOC106531354,LOC107683715 coding downstream 150456 6189364 ~ 6193500 (+)
G139351 NA non-coding upstream 201133 5818052 ~ 5819125 (+)
G139263 cdk1,LOC106607826,LOC100136692 non-coding upstream 577979 5439777 ~ 5442279 (+)
G139238 NA non-coding upstream 653575 5366435 ~ 5366683 (+)
G139205 NA non-coding upstream 780768 5239350 ~ 5239490 (+)
G139170 NA non-coding upstream 951363 5067472 ~ 5068895 (+)
G139488 NA non-coding downstream 99213 6138121 ~ 6140671 (+)
G139498 NA non-coding downstream 155703 6194611 ~ 6197030 (+)
G139504 NA non-coding downstream 159362 6198270 ~ 6198502 (+)
G139505 NA non-coding downstream 160451 6199359 ~ 6199856 (+)
G139506 stambpl1,LOC107594159,LOC107758441,LOC107683716 non-coding downstream 162295 6201203 ~ 6201470 (+)
G139176 NA other upstream 921514 5096731 ~ 5098744 (+)
G138941 NA other upstream 1990334 4029524 ~ 4029924 (+)
G138888 grid1,LOC106607602 other upstream 2424150 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 2904177 3107458 ~ 3116081 (+)
AMCG00002784 NA other upstream 3525664 2492086 ~ 2494594 (+)
G139492 NA other downstream 108840 6147748 ~ 6153120 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 1027947 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 1337779 7376687 ~ 7379487 (+)
AMCG00002960 NA other downstream 1870344 7909252 ~ 7920908 (+)
G139784 NA other downstream 1884274 7923182 ~ 7926832 (+)

Expression


Co-expression Network