AMCG00002911


Basic Information

Item Value
gene id AMCG00002911
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 6086560 ~ 6092066 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002911
ATGATGATCTGCCTATCGGGACCAATAGGCAACATCTGGTCGGAGGAGTCGGTGAGGGTGAAGGCATGGCACAGGTTTTGCAAGCACATCTTGGCGACGAAAGCCCAAGTCACGGTGGTGGCAACATGCAGACACCCAGAAGCTGCCCCACATTTGCGGGAGCTGAGTGCCCAGCACCCCGGGACAGTGACGGTGCTGAAGGTAGATGTGACCCGAGAGCAGGACATAAGAGACGCCGCGGAAACGGTTAAAAGCACATTTGGGAAGCTGGACCTGCTCATCAACTGCTCGGCCATGCTGCACCCATCTGGGAAGGGCGAGACTAGTCTCAGGGATGTGTCTGCACAGGCAGTTCTTGCAACTCTGAGCACAAACGCAGTGGGTCCCCTGGTGATGGCCAGATATTTCAGCCCTTTGCTGGTGAAAGGCAGCGGCGGGTTTGGCCGTCAACCACAGGATCAGTGCCAGCAGCACAGTGGCATTCTGGTGAACATGACCGCTAGAGTGGGCTCTATTGGCGACAATGGTTTAGGCGGATGGTACAGCTATAGGATGTCCAAAGCAGCACTGAACATGACTACAAAGAATCTCTCCATCGAACTGGGCAGGGGAAGACCAAAGATTGTGTGCGTCTCCTTACATCCGGGAACTGTCAACACAGAGCTGTCAAAGCCTTACCACAAAAACGTACCCAAGGACAAACTTTTTTCTGCACAATATTCAGTCCAGTGCCTCATGAATATCATAGACAGTCTCAGTATTGAGGAAACTGGGAAGGCGTTTGCCTGGGATGGATCTGAATTATCTTGGTGAACGCGTTCTTGAAGAATATTTGATTCTCCCATTGTGTGTCTTATCTCCAGACACTTGACTGGAAGCGTATGTTCCTGCAATAGTCataataaagacagaaaaatgcGAATGcagagg

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002911 True 930 mRNA 0.51 4 6086560 6092066

Neighbor

gene id symbol gene type direction distance location
AMCG00002904 NA coding upstream 47652 6020258 ~ 6038908 (+)
AMCG00002903 NA coding upstream 70315 6011828 ~ 6016245 (+)
AMCG00002900 NA coding upstream 173037 5908977 ~ 5913523 (+)
AMCG00002897 NA coding upstream 207536 5858274 ~ 5879024 (+)
AMCG00002895 LOC106577152 coding upstream 234689 5850528 ~ 5851871 (+)
AMCG00002908 LOC107553481,LOC107753437,LOC107669213,LOC107683711,LOC108413682,LOC107715956,LOC105902286 coding downstream 2039 6094105 ~ 6110512 (+)
AMCG00002910 NA coding downstream 25663 6117729 ~ 6132219 (+)
AMCG00002909 NA coding downstream 65707 6157773 ~ 6158567 (+)
AMCG00002916 acta2,LOC106531354,LOC107683715 coding downstream 97298 6189364 ~ 6193500 (+)
AMCG00002917 NA coding downstream 117662 6209728 ~ 6212571 (+)
G139351 NA non-coding upstream 267435 5818052 ~ 5819125 (+)
G139263 cdk1,LOC106607826,LOC100136692 non-coding upstream 644281 5439777 ~ 5442279 (+)
G139238 NA non-coding upstream 719877 5366435 ~ 5366683 (+)
G139205 NA non-coding upstream 847070 5239350 ~ 5239490 (+)
G139170 NA non-coding upstream 1017665 5067472 ~ 5068895 (+)
G139488 NA non-coding downstream 46055 6138121 ~ 6140671 (+)
G139498 NA non-coding downstream 102545 6194611 ~ 6197030 (+)
G139504 NA non-coding downstream 106204 6198270 ~ 6198502 (+)
G139505 NA non-coding downstream 107293 6199359 ~ 6199856 (+)
G139506 stambpl1,LOC107594159,LOC107758441,LOC107683716 non-coding downstream 109137 6201203 ~ 6201470 (+)
G139176 NA other upstream 987816 5096731 ~ 5098744 (+)
G138941 NA other upstream 2056636 4029524 ~ 4029924 (+)
G138888 grid1,LOC106607602 other upstream 2490452 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 2970479 3107458 ~ 3116081 (+)
AMCG00002784 NA other upstream 3591966 2492086 ~ 2494594 (+)
G139492 NA other downstream 55682 6147748 ~ 6153120 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 974789 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 1284621 7376687 ~ 7379487 (+)
AMCG00002960 NA other downstream 1817186 7909252 ~ 7920908 (+)
G139784 NA other downstream 1831116 7923182 ~ 7926832 (+)

Expression


Co-expression Network