AMCG00002912


Basic Information

Item Value
gene id AMCG00002912
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 6173898 ~ 6179201 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002912
ATGGCAGAAATATTTCTTTCATTCACAGCTCAAACAGGAACTGGTCCCAGCGGAGCAGAGGCAGAGGTAGAGCTGCAACCAATCTTAGTGGATCCACCGACAGATATTGACCTTGATCCACACTTGTACATGATTGCTGATAAAGTTGGATTGCCAGACATTAAGCAGTTGGTGACTCAGAGTGGAATATCTAGACCCAAAATGGACACGCTAATATTAAACGACCCAGATACTCGGGAACAGTGTGTAATTCTGCTGAGGGAGTGGTACCAAATTCAAGGTCTACACAATGCTTTTCCCAAACTAATCCAAAATCTACggcaaatgaaaagaaatgcaactGCAGATGAACTTCTGAGAGAAATTGAGAGATACATGCAAAATTTAAATGGTGTATAGAGTGATTTTTTATTGTACATATTAATAGTGTACAATGTTTTGTTACTGGTTATCATTGTGCAATGACACTAGAGTCACTTTGGTGGTTGTCTCTCTCAAGGTTTTTAGGAATATTTTAGCAGAAGAAATTGTAGTGCTGGATTCTTCTTTAACCTTCGAGATTCATATATCACTCAgtgttttaatacttttaaaacctTTAAGACCTTTTCATCTTGGCAATATTGCCTGTTTACATCTGTAAAGTTTGAAAGACTTTCATATACTTAATTGATctcattgtattatttgttaatgCATTGACATTAAGTAGTTAATTCTAAAATGTGCAATGaccaaaaatatgtaaaattaatgtAACTTTACCACAGAAACCCATCTTATAACAGGAAGATGCTTTCCAGCATACTAACCATAATTACcagacaaatacacaataaacataATGTAAAAGGATGGGCCGTTTACATACATTACAGTATAGATATGTCCCTGTAGTGCTGCACCACAGTTATTGTATTTGCAGTATGCGTGGTATATGCACATTGTGTGACATGAGTCATACTGCTTTAGAAATGTAACTGGATTGAGAAAATGATATACAACCCTTACAATCCACACAAGAGGGAGCTATTGTCAAGATATTTTTGCACATTTAGATAACTGTTACAAGGCTGACTTTTAGAGAAGTAAATtgtatatttgctttttatttggaACACTTTTGAGAAATAAGCAGCAAAAAGATAAACTGAcgaatagaaatacaaaatgcgaaaaaagtaattttctgaGAATTTCGATAAGTATGAATCTATTTCCTTAGGTTCTTCTATCACAGAGAGTTGGGTGTTGAATTGATATTgttgttctttatttcacaataataataaacaataaccaCTGTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002912 True 1310 mRNA 0.34 3 6173898 6179201

Neighbor

gene id symbol gene type direction distance location
AMCG00002913 NA coding downstream 29505 6142903 ~ 6144393 (-)
AMCG00002914 NA coding downstream 32886 6132834 ~ 6141012 (-)
AMCG00002905 LOC107584235,LOC100536080,LOC107758424,LOC107669182 coding downstream 87426 6083761 ~ 6086472 (-)
AMCG00002907 NA coding downstream 153756 6016336 ~ 6020142 (-)
AMCG00002906 pcgf5,LOC108410714,LOC106589380,LOC107584148 coding downstream 175125 5974562 ~ 5998773 (-)
AMCG00002919 stambpl1,LOC106589388,LOC107669191,LOC107594159,LOC107584140,LOC107758441,LOC107683716 coding upstream 17773 6196974 ~ 6201996 (-)
AMCG00002920 NA coding upstream 35658 6214859 ~ 6227743 (-)
AMCG00002922 pten,LOC104929647 coding upstream 118536 6297737 ~ 6319780 (-)
AMCG00002924 papss2,papss2b,paps2,LOC107753426,LOC107584134,LOC107680272,LOC107724695 coding upstream 152449 6331650 ~ 6344823 (-)
AMCG00002923 NA coding upstream 166639 6345840 ~ 6354866 (-)
G139496 NA non-coding downstream 15135 6157743 ~ 6158763 (-)
G139249 NA non-coding downstream 777339 5396339 ~ 5396559 (-)
G139039 NA non-coding downstream 1589726 4583865 ~ 4584172 (-)
G139029 NA non-coding downstream 1662591 4507504 ~ 4511307 (-)
G139028 NA non-coding downstream 1677536 4496162 ~ 4496362 (-)
G139593 LOC100846954,LOC107575789 non-coding upstream 303066 6482267 ~ 6510125 (-)
G139639 NA non-coding upstream 822464 7001665 ~ 7073536 (-)
G139668 NA non-coding upstream 1039668 7218869 ~ 7219192 (-)
G139752 NA non-coding upstream 1276343 7455544 ~ 7458491 (-)
G139825 NA non-coding upstream 1766851 7946052 ~ 7946521 (-)
G138932 NA other downstream 2171094 4001650 ~ 4002804 (-)
AMCG00002828 NA other downstream 2220574 3928761 ~ 3953324 (-)
G138741 NA other downstream 3454479 2718208 ~ 2719419 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 5248500 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 5352307 805760 ~ 821591 (-)
AMCG00002935 LOC106589936 other upstream 883272 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 1169610 7348811 ~ 7352821 (-)
AMCG00002970 cj104,anapc16 other upstream 1751965 7931166 ~ 7938241 (-)
G139933 LOC108443181 other upstream 2306160 8485361 ~ 8494596 (-)
G140006 NA other upstream 2667831 8847032 ~ 8847840 (-)

Expression


Co-expression Network