AMCG00002915


Basic Information

Item Value
gene id AMCG00002915
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 6255170 ~ 6266600 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002915
ATGGCGCCATCAGCAAACGTGATACCAGTTGATGGGCCGAGtgTAATTGACGGGACTGGGAGGCAGACGCTGGGAGCTGTGAGTTATTCCTCTCGCTACGCTCTGGGACTCTTCTACAAAGCTGACACGCAGATTGATGTCCCCTGGGCAGCAAAGTACATCACCAATAATCCCTGCGTACGCTTCATCTCCATCGATAATAAAAAGCGCAATTTAGAGTCTGCGGGCAGTGGGCCTTCCCTGGCTGTCCACACCAGCGTGCCCTTTGGAGTCCAGCATTTGGACAAGACAATTGAGGAGGTGGAGCCATTGATTCTTAAAGAACTGCAGCAGGTTCTGCCAGGATTGCCTAAGCCCCTGAGCACGAAATGCCAGAAATGGAGATATTCACAGgTGACACAATCGGTGACTGGTAGCCCAGGTCAGATGACCCTGAGTTCCAGGCCTCTGCTCGTTTGTGGGGGGGATGGATTCACACACTCCACCTTCGATGGCTGTATAGACTCAGCTTTGAAAGTCCTGGAGGTTTTCAGATCCAGTCTCTGTTGA

Function

GO: NA

KEGG:

id description
K18208 RNLS; renalase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002915 True 549 mRNA 0.52 4 6255170 6266600

Neighbor

gene id symbol gene type direction distance location
AMCG00002918 NA coding upstream 21015 6228187 ~ 6234155 (+)
AMCG00002917 NA coding upstream 42599 6209728 ~ 6212571 (+)
AMCG00002916 acta2,LOC106531354,LOC107683715 coding upstream 61670 6189364 ~ 6193500 (+)
AMCG00002909 NA coding upstream 96603 6157773 ~ 6158567 (+)
AMCG00002910 NA coding upstream 122951 6117729 ~ 6132219 (+)
AMCG00002921 atad1,atad1b,LOC106589392,LOC107680273 coding downstream 53536 6320136 ~ 6329764 (+)
AMCG00002925 NA coding downstream 130857 6397457 ~ 6409095 (+)
AMCG00002926 NA coding downstream 143826 6410426 ~ 6419383 (+)
AMCG00002928 LOC106589397 coding downstream 188272 6454872 ~ 6455141 (+)
AMCG00002930 prkg1,prkg1b,LOC107708873,LOC107695529,LOC106589397 coding downstream 197113 6463713 ~ 6464276 (+)
G139507 NA non-coding upstream 52111 6202844 ~ 6203059 (+)
G139506 stambpl1,LOC107594159,LOC107758441,LOC107683716 non-coding upstream 53700 6201203 ~ 6201470 (+)
G139505 NA non-coding upstream 55314 6199359 ~ 6199856 (+)
G139504 NA non-coding upstream 56668 6198270 ~ 6198502 (+)
G139498 NA non-coding upstream 58140 6194611 ~ 6197030 (+)
G139531 NA non-coding downstream 31134 6297734 ~ 6311270 (+)
G139573 NA non-coding downstream 151838 6418438 ~ 6418798 (+)
G139572 a1cf,LOC107708930,LOC107695528,LOC107654048,LOC107739758 non-coding downstream 153566 6420166 ~ 6423168 (+)
G139633 NA non-coding downstream 795923 7062523 ~ 7066374 (+)
G139656 NA non-coding downstream 885937 7152537 ~ 7152739 (+)
G139492 NA other upstream 102050 6147748 ~ 6153120 (+)
G139176 NA other upstream 1156426 5096731 ~ 5098744 (+)
G138941 NA other upstream 2225246 4029524 ~ 4029924 (+)
G138888 grid1,LOC106607602 other upstream 2659062 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 3139089 3107458 ~ 3116081 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 800255 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 1110087 7376687 ~ 7379487 (+)
AMCG00002960 NA other downstream 1642652 7909252 ~ 7920908 (+)
G139784 NA other downstream 1656582 7923182 ~ 7926832 (+)
AMCG00002965 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other downstream 1770977 8037577 ~ 8044413 (+)

Expression


Co-expression Network