AMCG00002934


Basic Information

Item Value
gene id AMCG00002934
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 7040280 ~ 7059888 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002934
GAGTGTTTGCGACAGTAGTGGAAATGCCGCAAGTGCGAGAAAGTCGTCTGTTTCACCAGCTCGTACTAACTGCAACATTTAGGGCGAGATCACAGACGCCGACACGATCAAAGAAGTCGTGAAGATCTCGCCTCTTGCATATGAGCAGCCGGGGGGCTTGAGGAGATATTGCACCGGGAAGCATTTTGTTTGTGGGCTACAAGAAGAAACAAGCTGGAGTATCGCCCTCAATAGAGATGTCACGGTTTATTGATGCTGGGCTGTGCAGCTATAGTTAGTGGGCATCAAAGCTCACAAAATAACCCATGCTTTGTTTTGCAAATCACGTCAGATAGCCTGCTAAAGCCGAATCGGACAGACGGTTAGGATCTTCGGAGTTATCATCAACATTAGCCCTGGGGAGGAGTACTGACGTTCCCCAGTGAGGAAGTGGGATGTGGCCAGACTGTATTTTGTGTGGCTGTTTAAGATGTGAAAACCATTCAAGTCGCAAAAAGGTTGTGGGACCTTGTTACATGGTATCATTAAGATATAGACTCGGTATCTGATGGCTGCACGTCCATGATGCCCAGGATGAAGCCTGCTTCTGCTGATCTCAAATCTGTCGTCCTCGCTGGAAGCACGCCGCCCTTTTAAAACAGCCCCAGaaaggtgtttttatttgttcgtGTCTTGTTTGGTTTGTCCCGCAAAGAAGCAGCAATCGGGTCCCAGGCATTGGCCCAACATGTCAACCCATCATCAGATCATGGACTCGTCCCTGTCCCTGGGAAGGCTGGAGATCAAGAGCCAGATGGTGACCCTGGACAGCGGTCTGTCGGGGCCGGGgatggagaagaagaagaaggcgCAGGATGGACCCCAGGCGCACCTGAATGGATGCGTGCCTCTCTCCCACCAAGTGGCCGGGCATAAGTATGGAATAGATAAAGTAGGCATATTGCAGCATCCAGATGGCACCGTTTTAAAGCAGCTACAACCTCCTCCTCGTGGCCCGAGGGAACTGCAGTTTTACAGCAAGGTGTATTCCGAAGAGTGCTGTGACCCTTTCCTACTGGACCTTCAACACTACCTTCCAAAGTATTTCGGCACATGGACACCTCCTGTTGCTCCCAATGACCTGTACCTTAAGCTGGAAGATGTGACTCGCAAGTTCAACAAGCCGTGCATTATGGACGTAAAGATAGGCCAGAGGAGTTATGACCCCTACGCGTCCAAGGAGAAGAGAGACCAGCAGATCAAGAAGTACCCGCTGATGGAAGAGATTGGCTTCCTCGTGCTGGGAATGAGGGTGTATCATGTTAGAACTGACAGCTATGAAACCCACGACCAGCACTATGGAAGAAGCTTAGTAAAAGAAACCATTAAAGATGGTTTAGCCAAATTCTTCTTCAACGGGAGCTGCCTCAGAAAAGATGCCATCTCTCTCGGCATCCAGAAGGTTCAAAAGATACTGCAGTGGTTCGAGGGCCAGAGCcagttacatttttatgcaAGTTCTTTGCTCTTCGTGTACGAGGGCTTGCCTCTGCAAACGGCTCCGCAGCGGGTCGAGGGAAGTCTGGCGGTAGAGACGGCGCTTCCCAAGGGGACCCTGCCGGATGGGGAAGTCCTGGAGTTCAACAACAACGTCCGCGTGATCGGCCCCGCGGAGAACGCGCTCGGCCAGAGCCTTTCGAACCTGTACGCGCTGCACAAGAAAGGCTGTTCCAAGGGCCATCACCGCGACATCCCCTCCGAGATCAGCAACGCCAGGCAGGACAATGGCCCGTGGAAACGCACTACTCAGATCTCGCTCGAGCAGCCCAACGGCAACGATCTCAAACCCCCACCGGAGAAGCAGAGCCCGGTGGCGGCACTGACGGGCAGTGAGGTCGAAGTGAGGATGATCGACTTTGCCCACGTCTTTCCCAGTAACACCAGAGATGAGGGCTACATCTACGGGCTGAAGAATttgctctctgtgctgcagcagATCCTGAGTGATTAAACtcctttggttttgtttgtttgtcagtcTTGTTGATGCACTTCTGATTACTGGGGCCAATAGTAAAGAACGAGTAGGAGCCATCATGCAAAGAAATCTGCACTAGCATTGATGCataatttgtttgtaattcTTTGTGTATTACATGTGCTTGTTTTGTACTTCTGGTAACAATAGTTTAATTTTATACGTATCTTACTCaggtaaattaatacatattcacATTAATGTTAACTTTTGGGGGGGAAACTTAACTTAGACCAGTTAACTCTTCGAGGGACAGTGAGAAACAGTGGATTACCATGACTTGCACAGTAAATTAGATTAAGTACACTTTTATGGAAAACTGtacatgttttccattttgaaatccCAGAAActactgattttaaaatatatatatatatatatatattcataacatttttatttatatttctgtcaaGAGTtaccaaatacacacatatggtaaatatacagtatatagggTTGATatcttatataaaatatatatataacataacattatatatatatatatagttcgtttgttttttgttttactgccaAAATGATTACATCTGTTCTTCAGCCAAACTTTCCTAAGATGGTGGTGAAAGAAACGAGAGATGTCTGGCGTTCTTTTTAATCATATGAATGTGAATGGGTTTTAATCATTTAGGATATTTATGCATAATATGaaaattgttttactgtaactAGATGAAACATGCTGCTGTGATATGTAAGGAATATAGCGTGGAGTGAGACTTGACTTTAAAACTAAACTACAGGATAGGAATGCTTTATTTCACTAGATAAGACCCACGTGAAGCTAAACTTTGCCAAAATGAGAAGTTTTGCGTTTGCGTTTGAGGGTAAATGAGATCTCTCCAGACCTTCACATTTACGATAAGAATACCGAAGGATCTGTCACATGTAATGAAATGCGGCGATACACATCAAAGgtagacttttttgttttaaccccCAACTCTGTCTCCAAGCATTGTCCCATCATGAGGCCACAAAACCCACCGCGGCgttgctttaatttatttatctttgcaTCGCCTCACACTTCATAGGTTTGCTTTAGATCGattgaatttatatttatttcttagcagatgcccttttccCAGGTCATATTGAAtgtgacaattattatttcaatttgcaGGTGTAAGTGCTGCCTTTGTTTTGGGcctttattttgattatatgtGACACCGCACTAAGAGGTGGATATCGCTCAGGCATTATTAATCCCCTCAAAGACCACCGTAAGTGAAGCTTctccaatatgtttttcttgttggaCCTGACTTAAGAGAGGGAGCAGTTTCAGTTTCTGGTATGAGTGAGGCTTCAATCTAGACCTTGATAATAAAGTATTGATCATTTAGATTGACATTTCTATCCCCAGTAAAGGCAGACAGTGATGTTTTCATGTACCTGGGTATATGATCGACTCAGCTGGTGTTTTTATCCATGTTCGTCCTTAAACTTTTCAATGGAACGAGAGAAAAGAAACTTCCCTGAGGTTTGACTTCCCCATAAGCCTAGATTTTAATAACTTGGcataaatgtatcatttatgtatctctcctttttatttgctttaagaTGTGGCTGCTAATAACCCTAATTCAAAAAGAGGTGAtcaagttaaaaatacattaatattattgtatatatttgatttcaCCAGATTAAATCAGTGTCAGACAAATCCTTACACATTTTGccctagaccaaataaaaatcGCAGATAAAATtgcttgtgaaaataaattaaatcagaattgGATTGCTTGGCTGGGGTaaagctttgatttggtctaggcatTGGTACTGAAATGGCAGGaagcccatttttttttttctgttcatattCATACTTGATAAAATATGGATGTGTTCCTAGATGGACATACATGTAATTGTATTGTGAGCAAGTTTTAACATTGCCATTATCTGAATCCAAGTAATGTGCTGTTAGTGGGTTTGGATACTGCCTTATTTCGTTTCTTCTtccaaaaacatacattataagtTTTATTGTGATTGTTATCGACTCGGTACTCAAGTCTCATACgttctgttttaaatacaaactcTTTTTTATCTATTTGAGAGTGACAGTAAGTGTTCATAGGGTGTCTGTTCCtcgttttttttctccactgttATGTCAAATACATAATATAGTTTCTGCTCCCTACTAACTAAAGGGCAGGAGCGACTTTTCAAGGCAGCTGTTTGTACCGTATCTATCAGGAAATGTCCACAAAACTGGACTCTCAAAGCTGATTGTCTTAATACTGATGTTAAGTGCAGAAACTGGCAAACTGGAGTAAATGGACATCAAGGGataaaataagattatttttataaaagccCATATCCAAATATGCATGCATGAACTACTGTACAGTGTTTGCTCAATcgcattttatcattttaacttGGATAGGACTGTTTTAGTTACTGTTTGGGCAGTATTGCAATGTAATCTTTCCTCCCTGAGCAGAAATCTGTCTTAATGGcgtttttatttaataccatACCATGTGATGTGAACTCTGACCTTTGTCAGGAAAAACTGGTTTTATAGAAAACTTGAGTTTCCAAAGTAAAAGAGCAATTGATATTTGACTTGGAAATTTAAATTAGGTTagtacatttttattctaaAGCTGCTTTTAAAATTGCACTTCTAAACTTCTTATGATTCTGGTAATCCTTGAAAGGTTTCTCTTTGTATTGTCTGTCGGGACTGATTTCCTCCAAGTTGCTCAAGATGCAGTGAGAGTTTTGAGACAGTCGTGCCATTGgcaggagagatggaggggacATTTGGTCTTTTGTGTCTGTGCTCACTGCACTTAATAAAGTTACAGCAGTATCTTCCATTTTTGTTGATCTAATCCGAAGACACCATCACTcagtctaaatatatatatatatatatatatatatatatatatacatatattgtttatgGGCAACTTAACAGCTGATTGTTTAATTCTGACTCGATAGTGTGAAACGTCTTATTGCAGCATCTTAAATACCTGGGTGCACTGGGGAAATGAGACACTCCTTTTCACATTGGAAATAAAAGGACTAGACAATACGTGTATACTGTATATCGGCGNNNNNNNNNNGGGGCAGTTGTTGCAGCTTAGTTTCAGatctttattttcagtctttcagATAGTAACGCTTAACAAACTGCATCCTTTTTATTTACATGACATGTATGTTTTGCTGggtaaatgttttcttgtagTGAACCTTCATTTTCaagtacatatacagtataaaagtgTGTTGATCCTTTTGCTGTGAATTGACTAAGGACTTTCCCTGTGTATTTGAATGGTATTCGCTGTTACTGCCATGCAACCGATTTCTTATGCACCCGTTTCAAAGTTTTGAAATGCAGCAAGCAGTGCACGGAGACACTTTAGTAGTATTGGGAATGGACTGGACCTTCTTTTAAGAAACTGCGAAGAACAGGGCTGAACTTTAGCTGGTTTAAAAAAACTAGAGCGAACGCTTCTTCGTAAGCTTTCTTGTGTTCAGTAACtgctgaaaacataaaaagcttCATAAGCCTTTACTTACTTTACTATAAGTTCCAGATAAAGCGAACACTGAGTTAAATTTGAGCCCTGGACTCTCACATGTTGTATTCTCTGGAATATGCAGCTTTGTGTCAGCTGTGTCTGACTGCTATTCTGTCTGATCTGACCCTCTTTGTCCTAGGcatctgaatttattttacacggactgtgtctgtctctggATTGTGAATGATTAgtcttttcttttgatttctttatgaaaaaaaaatgcaggggAAAGTATTCTTGTGTAATTGCTATTTTTCCTTTTAGATCCAATTTAAATGATATAATTGCCTACTTTTGTAAGTGAAATGTGATAAATGATATTTAGATAAAACATAATGGCTGTATATTTGGCAGATTTAAATTACTAATAAAATTACTCCCAACAAAATGTTTGTTGTCAGCTTAACTTTGGGATTGATTTAAGCGGTTCTCTCTGAATGTTAATAGCATTTTGCACTTGCGGAAACTGTTTTTCAGATGAAGGATAATTAAGTCTGACTTCCTTATTtgctacattattatattaagtatattGCCCTgaatctgaataataataatacaaaaacagtacaaaaacagatttgtttcagGGATGggaaaacaggaaatatttGACCAGGAGGGAAAACCATTCttcacctttaaaataaaagtagatTGAAACCAATACCTGCAGTAAAAAGTGGCTATGTTctaattttttttacaattggtAATTGTAGGTGGATTGTGGTTACACAACTTACCTTAGAGACAGAATGGGAACCTAgccttaaaaataacaaaaaataacacatattgGAGCCACTGTAACTAGGAAAGATGTGACCTGTTTGTCACGTTTGTTCacgttttgttgttttcaggaCTTAACAAGCAGCATGTTTAACTACACTCCGCAGACACTCAATAATCATCGTGACACCACAAGTATCAattcatgtaattaatttatgtataaatatcgTACTCAGAGTAACATTTTGCATGCAATGGTGGTTTGAATGTGATGAGGGcccaggaataataataatgaaaaaaaagcaatccttttttagtttttcgAGGAAacggtaaaaaataaaacct

Function

GO: NA

KEGG:

id description
K00915 IPMK, IPK2; inositol-polyphosphate multikinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002934 True 6723 mRNA 0.40 6 7040280 7059888

Neighbor

gene id symbol gene type direction distance location
AMCG00002933 pcdh15b,LOC108273410,LOC106578947 coding downstream 283489 6743734 ~ 6756791 (-)
AMCG00002932 LOC106589399,LOC101467287,LOC102215614 coding downstream 303006 6645632 ~ 6737274 (-)
AMCG00002927 a1cf coding downstream 610840 6422004 ~ 6429440 (-)
AMCG00002923 NA coding downstream 685414 6345840 ~ 6354866 (-)
AMCG00002924 papss2,papss2b,paps2,LOC107753426,LOC107584134,LOC107680272,LOC107724695 coding downstream 695457 6331650 ~ 6344823 (-)
AMCG00002936 NA coding upstream 18046 7077934 ~ 7081623 (-)
AMCG00002941 NA coding upstream 129449 7189337 ~ 7197989 (-)
AMCG00002948 chat,LOC107588646,LOC107683741,LOC107707518,LOC108245700 coding upstream 303164 7363052 ~ 7371613 (-)
AMCG00002947 NA coding upstream 342693 7402581 ~ 7407518 (-)
AMCG00002951 NA coding upstream 374363 7434251 ~ 7446572 (-)
G139593 LOC100846954,LOC107575789 non-coding downstream 530155 6482267 ~ 6510125 (-)
G139496 NA non-coding downstream 881517 6157743 ~ 6158763 (-)
G139249 NA non-coding downstream 1643721 5396339 ~ 5396559 (-)
G139039 NA non-coding downstream 2456108 4583865 ~ 4584172 (-)
G139029 NA non-coding downstream 2528973 4507504 ~ 4511307 (-)
G139668 NA non-coding upstream 158981 7218869 ~ 7219192 (-)
G139752 NA non-coding upstream 395656 7455544 ~ 7458491 (-)
G139825 NA non-coding upstream 886164 7946052 ~ 7946521 (-)
G139867 NA non-coding upstream 1051137 8111025 ~ 8115245 (-)
G139881 NA non-coding upstream 1121402 8181290 ~ 8181576 (-)
G138932 NA other downstream 3037476 4001650 ~ 4002804 (-)
AMCG00002828 NA other downstream 3086956 3928761 ~ 3953324 (-)
G138741 NA other downstream 4320861 2718208 ~ 2719419 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 6114882 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 6218689 805760 ~ 821591 (-)
AMCG00002935 LOC106589936 other upstream 2585 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 288923 7348811 ~ 7352821 (-)
AMCG00002970 cj104,anapc16 other upstream 871278 7931166 ~ 7938241 (-)
G139933 LOC108443181 other upstream 1425473 8485361 ~ 8494596 (-)
G140006 NA other upstream 1787144 8847032 ~ 8847840 (-)

Expression


Co-expression Network