AMCG00002959


Basic Information

Item Value
gene id AMCG00002959
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 7828091 ~ 7829718 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002959
ATGGCTTTTCTACCAGGAGCTCAGACACAATCTCCTTGCTCCACAACTGCAGGGAACTGTGTCTATGATTTCACAGTGGAGACCCTGCAGGGTCAGCCTGTATCACTGAGGAAATACAAGGGCAAGGTGCTGCTCATTGTCAACTACCTCCAATTGAATGCACTCATGGAAATGTTTGTCGGTACCAACTTCATGGTCCTTGGATTCCCGTGTAACCAGTTTGGTCTCCAGGATCCTGaGGAAAATCATGAAACATTAAATGTCCTGAAGTATGTTAGGCCAGGTGGTGGATTTATCCCCaagtttgaggtgtttggaAAAGTGGAAGTGAATGGACAATATGAAGATGCTCTCTTCACATTTGTAAAGAAATTCTACTGGTCTCCTATTAAAGTGAGTGACATACGATGGAACTTTGAAAAGTTTTTGATCCAAGCTGATGGAGTTCCATATAAG

Function

GO:

id name namespace
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002959 True 456 mRNA 0.43 4 7828091 7829718

Neighbor

gene id symbol gene type direction distance location
AMCG00002955 NA coding upstream 6628 7812509 ~ 7821463 (+)
AMCG00002952 pax2a,pax2 coding upstream 94554 7695359 ~ 7733537 (+)
AMCG00002949 NA coding upstream 327501 7489371 ~ 7500590 (+)
AMCG00002946 LOC108442250 coding upstream 403010 7412109 ~ 7425081 (+)
AMCG00002942 ogdhl,LOC107707496,LOC107683740 coding upstream 481143 7313942 ~ 7346948 (+)
AMCG00002953 ndufb8,LOC102781364,LOC106577308 coding downstream 13826 7843544 ~ 7845870 (+)
AMCG00002954 NA coding downstream 18260 7847978 ~ 7863421 (+)
AMCG00002961 NA coding downstream 108714 7938432 ~ 7946524 (+)
AMCG00002966 spock2,LOC108443083 coding downstream 125498 7955216 ~ 7998025 (+)
AMCG00002974 NA coding downstream 241266 8070984 ~ 8081794 (+)
G139667 NA non-coding upstream 630994 7196878 ~ 7197097 (+)
G139656 NA non-coding upstream 675352 7152537 ~ 7152739 (+)
G139633 NA non-coding upstream 761717 7062523 ~ 7066374 (+)
G139572 a1cf,LOC107708930,LOC107695528,LOC107654048,LOC107739758 non-coding upstream 1404923 6420166 ~ 6423168 (+)
G139573 NA non-coding upstream 1409293 6418438 ~ 6418798 (+)
G139827 NA non-coding downstream 123408 7953126 ~ 7953340 (+)
G139832 NA non-coding downstream 168495 7998213 ~ 7999259 (+)
G139836 NA non-coding downstream 173084 8002802 ~ 8003057 (+)
G139837 NA non-coding downstream 173597 8003315 ~ 8003645 (+)
G139838 NA non-coding downstream 174186 8003904 ~ 8005450 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other upstream 448604 7376687 ~ 7379487 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other upstream 754553 7066855 ~ 7073538 (+)
G139492 NA other upstream 1674971 6147748 ~ 6153120 (+)
G139176 NA other upstream 2729347 5096731 ~ 5098744 (+)
G138941 NA other upstream 3798167 4029524 ~ 4029924 (+)
AMCG00002960 NA other downstream 79534 7909252 ~ 7920908 (+)
G139784 NA other downstream 93464 7923182 ~ 7926832 (+)
AMCG00002965 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other downstream 207859 8037577 ~ 8044413 (+)
AMCG00002982 NA other downstream 663287 8493005 ~ 8496965 (+)
AMCG00002996 NA other downstream 1407022 9236740 ~ 9244099 (+)

Expression


Co-expression Network