AMCG00002972


Basic Information

Item Value
gene id AMCG00002972
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 8022647 ~ 8025932 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002972
GATTAACTGTTTCTCCAACTAGTAGCACCTTGGACTCAGAAAATGGACACACCAGTTTATCTCAAGGGAAGATGGACAATTACACCTTCTCTTCCTACTTCCAGCACTCTCTGCCTGTAGCGACCATATTCATCTTTGCCTATATCCTCATCTTCTTCCTGTGCATGGTTGGCAATAtccttgtttgtttcattgtgttAAGAAGTAAGCAGATGCGAACTGTCACAAACATTTTCATCTTGAACCTAGCCATCAGTGATCTGCTCGTTGGGATATTCTGTATGCCTACTACACTAGTTGACAACTTGATCACAGGTTGGCCATTTAACAACACCATGTGTAAAACAAGTGGCCTGGTTCAGGGAGCGTCAGTGTCGGCTTCAGTCTTCACCCTGGTGGCAATCGCTGTCGAAAGGTTTCGTCGTATCGTTTACCCTTTCCGTCAGAAGCTAACACTTAAGAAAGCCACGATCACCATTGCAGTCATCTGGGTTCTAGCTGTCATCATCATGTGTCCCTCTGCTGTGACCTTAACTGTCTCGAAAGATGACTTGCATTTCATGGTAGATGACTATAACAACACCTACCCCCTTTACACTTGCTGGGAGGCCTGGCCTGACCAGGATATGCGCAAGATCTACACCGCAGTCCTATTTTGCCACATCTATGTGGCCCCACTAACTCTGATTGTCATCATGTATGCCCGCATCGTCATCAAGCTCTTCAAGTCTCCAGCCCCCATAAGGGACTCCCTCTCAGAAGACAATGATGGACGTAAGGTGTCCAAAAAGAAAGTCAGAGTTATCAACATGCTGGTGATCGTGGCCTTACTCTTCACTGTGTCCTGGCTGCCCTTATGGGCTCTGATGTTGCTGACAGACTATGGCAACTTGACGGCAAGCCAGCTGAACATTGTGACTGTGTACATCTTCCCCTTTGCCCACTGGTTGGCCTTTTTCAATAGCAGTGTAAACCCCATCATATATGGCTATTTCAATGAAAACTTCAAGAGAGGGTTCCAAGCAGCTTCCAAGTTCCAGCTCTGCTCCTTGGAAATGGAGATATATGACAGAAGAGTCAGTGGCAGAACTCAGAACCGCATCTTTGTGGAGGTCAAGCCCAGCAGCACCCAT

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG:

id description
K04240 NPFFR1; neuropeptide FF receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002972 True 1133 mRNA 0.47 3 8022647 8025932

Neighbor

gene id symbol gene type direction distance location
AMCG00002971 NA coding downstream 1245 8012852 ~ 8021402 (-)
AMCG00002968 sar1b,LOC107668454 coding downstream 11711 8006321 ~ 8010936 (-)
AMCG00002967 NA coding downstream 16907 7997702 ~ 8005740 (-)
AMCG00002962 NA coding downstream 95052 7926010 ~ 7927595 (-)
AMCG00002964 NA coding downstream 111692 7909549 ~ 7910955 (-)
AMCG00002969 NA coding upstream 7523 8033455 ~ 8038071 (-)
AMCG00002975 NA coding upstream 19283 8045215 ~ 8048434 (-)
AMCG00002981 NA coding upstream 148980 8174912 ~ 8176893 (-)
AMCG00002978 NA coding upstream 157523 8183455 ~ 8195892 (-)
AMCG00002980 NA coding upstream 172744 8198676 ~ 8203314 (-)
G139825 NA non-coding downstream 76126 7946052 ~ 7946521 (-)
G139752 NA non-coding downstream 564156 7455544 ~ 7458491 (-)
G139668 NA non-coding downstream 803455 7218869 ~ 7219192 (-)
G139639 NA non-coding downstream 949111 7001665 ~ 7073536 (-)
G139593 LOC100846954,LOC107575789 non-coding downstream 1512522 6482267 ~ 6510125 (-)
G139867 NA non-coding upstream 85093 8111025 ~ 8115245 (-)
G139881 NA non-coding upstream 155358 8181290 ~ 8181576 (-)
G139902 rps24,LOC106591086 non-coding upstream 204437 8230369 ~ 8234284 (-)
G139937 NA non-coding upstream 468922 8494854 ~ 8495297 (-)
G139960 dlg5 non-coding upstream 591503 8617435 ~ 8618101 (-)
AMCG00002970 cj104,anapc16 other downstream 84406 7931166 ~ 7938241 (-)
AMCG00002945 NA other downstream 669826 7348811 ~ 7352821 (-)
AMCG00002935 LOC106589936 other downstream 956297 7062473 ~ 7066350 (-)
G138932 NA other downstream 4019843 4001650 ~ 4002804 (-)
AMCG00002828 NA other downstream 4069323 3928761 ~ 3953324 (-)
G139933 LOC108443181 other upstream 459429 8485361 ~ 8494596 (-)
G140006 NA other upstream 821100 8847032 ~ 8847840 (-)
G140015 NA other upstream 1210726 9236658 ~ 9237730 (-)
AMCG00003017 NA other upstream 1571011 9596943 ~ 9607316 (-)
AMCG00003049 NA other upstream 2275868 10301800 ~ 10331372 (-)

Expression


Co-expression Network