AMCG00002974


Basic Information

Item Value
gene id AMCG00002974
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 8070984 ~ 8081794 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002974
ATGGGTACAACTGCCAGTGCAGCTCAACAGACAGTTTCAGCAGCACCTCCATATGAAAGTGTTCATGGCAACGGGATGGCTGACAACAGGCGATCACTGAGCATTAACTCTTTTCAGACGGTCAATATtcacaacaacaaagcaaaatctATCATTACCAATAAGGTGGCACCTGTCGTCATTACgtATAATTGTAGACAAGAGTTCCAGATTCACGATGATCTTCTCAGAGCAAATTACACTGTGGGCCGAATCTCGGACACAATGCCTGAACACTACCTAGTACAGCTTTATGACTTCGCTAAGCTGAATGAAAACGTGTACTATGTCTACAATGACATAGAGCACTTCAAAGATGAGCCTCAGCACATCAAAATCACCTGCGAAGAGGACATTCATGTGACTGAAGAGGTTTACAAGAGACCTGTCTTTACCAAGCCTTCATACAGGGCTGATGGTGACGCTGGCAAGACTCCAAAAGCCCATTTCCAGATTATCCAAGCCTTTATCAACAAGCTGCCGAAAGGCCAGCAAATCACGGAAGAGGTTGACAGCGCCATAGGGCTGTGCTCGGAAATGCACGACATTAAAGGATCAatttatgaaaacaagaaaaaacttgAGGGGATTGGAGAGGATTATCAGATCCAGGGAAGTAGCACCAAAGAATATTTCCTCCAGAGGACATTGCAGAGTGTGGAGCGATACTTCTACCTGATTGCATTTAATGCCTACCTTCATGAACAGGTTGCAGATGAGTATTTGGCTCCAGATATCCTTAGTACGGTCAAAGAGATGAAGGTGGGCAACTTCAGAAGGGTGCCCAAGATGCCAGTGTACGGAATGGCACAGCCAACTTCAGAGGCCACGGGCGTGGTTCTGGCCTACCTGACGGACGAGAAGCGGAAGCATTCCCATGTCCTGTGGTTGAACCTGCAAGAGGAGCTGGTCCTGGAAGGCAATGGCCAGATGTTCACCCCCCGAGAGCCTGCCTTCCTGGAACAGCACATCCCTCTCCACGCCAGCACGCCACAGGAGCTCGAGaaaTTGGAGACGGCTGCCAAAGAGGAAATCCTGAAATCTCAGAAATGGCTGGAGGTGTCTCAAGAGCAGGAGAAGCAGATGAAGATGTTTAAAACGTGCCTGACGGTGCAAGAAATCTTCAACCAGCACAAGAGCTCCTACGAGGGACTGATATACAAGCGCATCCCTTTTCCCGACTGTTGTGCGCCCAAGGAACAGgATCTTGACATGCTTATGGAAGCTATGAAGTCGGCCCTGGCAGAGGACTCTCGCACAGCTTTTGTGTTTAACTGCCACAACGGCAAGGGCAGGACCACCACGGCCATGGTCATTGCTGCCCTCACCCTGTGGCACTTTAATGGCTTTCCAGAGTGCAGCGATGATGAGATTGTGAGCGTACCTGatgcaaaatacacaaaggGGGAGTTTGAGGTTGTAATGAAGATAGTGAGGCTTCTCCCTGATGGACACAGGATGAAGAAGGAGGTTGACATGGCCTTGGATGCTGTGAGTGAGACCATGACTCCAATGCACTATCACCTGCGAGAGATCATCATCTGTACCTACAGACAGGCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002974 True 1602 mRNA 0.49 13 8070984 8081794

Neighbor

gene id symbol gene type direction distance location
AMCG00002966 spock2,LOC108443083 coding upstream 72959 7955216 ~ 7998025 (+)
AMCG00002961 NA coding upstream 124460 7938432 ~ 7946524 (+)
AMCG00002954 NA coding upstream 207563 7847978 ~ 7863421 (+)
AMCG00002953 ndufb8,LOC102781364,LOC106577308 coding upstream 225114 7843544 ~ 7845870 (+)
AMCG00002959 NA coding upstream 241266 7828091 ~ 7829718 (+)
AMCG00002973 LOC107595167 coding downstream 54946 8136740 ~ 8172504 (+)
AMCG00002976 NA coding downstream 124597 8206391 ~ 8213095 (+)
AMCG00002977 rps24,LOC102780737 coding downstream 147853 8229647 ~ 8234400 (+)
AMCG00002983 zmiz1,LOC103381918 coding downstream 394898 8476692 ~ 8487793 (+)
AMCG00002984 anx11,LOC100702381,LOC101468000,LOC102303799,LOC102214080,LOC102778943 coding downstream 471785 8553579 ~ 8564616 (+)
G139850 NA non-coding upstream 49583 8020020 ~ 8021401 (+)
G139838 NA non-coding upstream 65534 8003904 ~ 8005450 (+)
G139837 NA non-coding upstream 67339 8003315 ~ 8003645 (+)
G139836 NA non-coding upstream 67927 8002802 ~ 8003057 (+)
G139832 NA non-coding upstream 71725 7998213 ~ 7999259 (+)
G139880 NA non-coding downstream 99511 8181305 ~ 8181534 (+)
G139906 NA non-coding downstream 197862 8279656 ~ 8280129 (+)
G139915 NA non-coding downstream 416220 8498014 ~ 8499226 (+)
G139916 NA non-coding downstream 417590 8499384 ~ 8507103 (+)
G139917 NA non-coding downstream 426083 8507877 ~ 8508483 (+)
AMCG00002965 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other upstream 26571 8037577 ~ 8044413 (+)
G139784 NA other upstream 144152 7923182 ~ 7926832 (+)
AMCG00002960 NA other upstream 150076 7909252 ~ 7920908 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other upstream 691497 7376687 ~ 7379487 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other upstream 997446 7066855 ~ 7073538 (+)
AMCG00002982 NA other downstream 411211 8493005 ~ 8496965 (+)
AMCG00002996 NA other downstream 1154946 9236740 ~ 9244099 (+)
AMCG00002998 NA other downstream 1218517 9300311 ~ 9316633 (+)
G140030 NA other downstream 1243694 9325488 ~ 9330464 (+)
G140189 NA other downstream 1696456 9778250 ~ 9780452 (+)

Expression


Co-expression Network