Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002980 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 8198676 ~ 8203314 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002980 | True | 676 | mRNA | 0.52 | 5 | 8198676 | 8203314 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002978 | NA | coding | downstream | 2784 | 8183455 ~ 8195892 (-) |
| AMCG00002981 | NA | coding | downstream | 21783 | 8174912 ~ 8176893 (-) |
| AMCG00002975 | NA | coding | downstream | 150242 | 8045215 ~ 8048434 (-) |
| AMCG00002969 | NA | coding | downstream | 160605 | 8033455 ~ 8038071 (-) |
| AMCG00002972 | NA | coding | downstream | 172744 | 8022647 ~ 8025932 (-) |
| AMCG00002979 | polr3a | coding | upstream | 11582 | 8214896 ~ 8229129 (-) |
| AMCG00002986 | zcchc24,LOC108245402,LOC104967378,LOC105029870,LOC103133498 | coding | upstream | 302375 | 8505689 ~ 8508352 (-) |
| AMCG00002985 | zcchc24,LOC107564348,LOC106577169 | coding | upstream | 325881 | 8529195 ~ 8542960 (-) |
| AMCG00002987 | NA | coding | upstream | 366904 | 8570218 ~ 8570907 (-) |
| AMCG00002988 | NA | coding | upstream | 368274 | 8571588 ~ 8580373 (-) |
| G139881 | NA | non-coding | downstream | 17100 | 8181290 ~ 8181576 (-) |
| G139867 | NA | non-coding | downstream | 83431 | 8111025 ~ 8115245 (-) |
| G139825 | NA | non-coding | downstream | 252155 | 7946052 ~ 7946521 (-) |
| G139752 | NA | non-coding | downstream | 740185 | 7455544 ~ 7458491 (-) |
| G139668 | NA | non-coding | downstream | 979484 | 7218869 ~ 7219192 (-) |
| G139902 | rps24,LOC106591086 | non-coding | upstream | 27055 | 8230369 ~ 8234284 (-) |
| G139937 | NA | non-coding | upstream | 291540 | 8494854 ~ 8495297 (-) |
| G139960 | dlg5 | non-coding | upstream | 414121 | 8617435 ~ 8618101 (-) |
| G140005 | NA | non-coding | upstream | 646355 | 8849669 ~ 8850559 (-) |
| G140007 | NA | non-coding | upstream | 729456 | 8932770 ~ 8932969 (-) |
| AMCG00002970 | cj104,anapc16 | other | downstream | 260435 | 7931166 ~ 7938241 (-) |
| AMCG00002945 | NA | other | downstream | 845855 | 7348811 ~ 7352821 (-) |
| AMCG00002935 | LOC106589936 | other | downstream | 1132326 | 7062473 ~ 7066350 (-) |
| G138932 | NA | other | downstream | 4195872 | 4001650 ~ 4002804 (-) |
| AMCG00002828 | NA | other | downstream | 4245352 | 3928761 ~ 3953324 (-) |
| G139933 | LOC108443181 | other | upstream | 282047 | 8485361 ~ 8494596 (-) |
| G140006 | NA | other | upstream | 643718 | 8847032 ~ 8847840 (-) |
| G140015 | NA | other | upstream | 1033344 | 9236658 ~ 9237730 (-) |
| AMCG00003017 | NA | other | upstream | 1393629 | 9596943 ~ 9607316 (-) |
| AMCG00003049 | NA | other | upstream | 2098486 | 10301800 ~ 10331372 (-) |
