AMCG00002995


Basic Information

Item Value
gene id AMCG00002995
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 9268917 ~ 9273158 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002995
agaggagCTACAGCATGGAGTATCTCACAAGTTCTCCACACAGGAGACCCCACAGCGATGTCCTCCGATCTCAGCAAAAGAGACTCGGATCTCTGTTCCCCAGGAGCTCGGTGAACACCGGCAACACCTCGTCTTTCAAAAGGAGCAATGTGATGCTGAAAAATGAATACGGCTCCAATCTCAGCTTTGATTTTGCCAACCATGTCTCCGGAGAGCTGAAACTAACGCATATGAATGaaaaggagctgctgcaggggcTGAACGACCGCTTTGCCGGCTTCATAGACAAGGTGCGTCTGTTGGAGAGCCAGAACACGATTTTGGAGAAGGAAATTGAAGAACTTAGGCAGAAGAAAGCCAGCCCTTCATCCCTGGCTCAGGTCTACGACCCCGAGATTAAAGACCTGCGCAAACTTGTTCACGAAATCACTCAACAAAAGCGTCAAATTGAACAAGATCAGCAACATCTGGAGGAAGATTTCTATATTTTACGGGATAAATATGAAAACGAAGTTCGTCAGAAAACAGACACCGAGGCCAGCATAATGACATTGAAAAAAGATATTAATGACGCATACCTGTCTAAGATGGAACTGGAAAAGAAATCTCAGTCACTCGTTGAAGAGATCATTTTCCTGAAGAAAAACCACCAACAGGAGGTGTGTGAGATGTTGGCCCAAATCCAGGAAGCTCAAGTTGGGGTAGAAGTCAAAGATTTTGGCAAGGCAGACATCACTGCGGCTTTGAGGGATATCAGGAAGCAGCTTGAAGGTCACACCGGCTGCAGCATCCAGCAAGCCGAGGAGGGTTTCCGCGCTCGGGTGGAAAAACTGACCAAAGCCGCCGAAATCAACAGTGAAGCCCTGCGGGCCACCAGACAGGAAATCAACGAGCACAGAAGACACCTGCAGTCCAAGAGCATTGAGCTGGAGACGGTGAAAGGCACCAAAGAGGCTCTGGACAAACAGCTGAATGACCTCGAAGAAAGACACGATGCAGAAATCAGTCATTACCAGGACACCATCAGAGGACTGGAGCATgaactaaaacatacaaagtATGAGATGTCTGGCCACCTTAGGGAATACCAGGATCTGCTTAATGTCAAAATGGCACTGGATGTGGAAATTGCTTCTTACAGgaAACTTCTGGAAGGGGAAGAAACCCGCCTCTCTTCAGTGTCTGGTGCCCAGGGTTCAGTGCCTTATGTATACAGACAATCCCCAGTGTACACTCTCCCGAGCCTCACAAGGCCGAAGAGCAGGACTGCAAAGGCAGAACCACAATACAAGTTTGTGGAGGAGATCATAACAGAAACGACCAAGGAAGTAGAGATGATGGAGATTGAAGACATGGCGTCTGAGGGAACAAATGATGAGGATGACAAGATTGGAAAAGTGAGcagtgaagaggaggagggagctGAAGCTAAGGAGCCTGAAGAGGAACAGGGGACTCCATCTGAGGAGCAGCGAGAAGAGATATTAACCGAGACCACTGACCAGGGAGAAACTGCACCTGgaggtgaggaagaggaaggtGCTGAAGAATTAGAGGAAGAGGGAGGTGCAgctgaagaagaggaagagggaggtgCTGCTGAAGAGGAACCTGCAGTGGAAGAGGCCCCAGAAGACGTGGAACCGGTGGAGGAAAAGGAAACCGACAACCCGAAGGTGGAGAAGGAAGTGAAGGAAGACATCGCTGAGGCAGTGAAGACCTTGGGGGAAGTCAAAAAAGCTGCTACAGAAAAAGCCCTAAAGGACACTACAGATGAAGTAAAAACACTGAGTGAAACTAAAGAGGCAGCAGAAGACAAAGTGGATGAATATGAATCTCAACAGAGCGACAGTGGAAAGATCTCAGAAAAGGATGAGACAGAAGCATCTCGATCAGATGTACCTCCTGAGGACAAACCCCAGAAAGAAGTAACAGATGACTCTGAAGACACAAAACGGGTGAGTCCTGTAAAAGAGAAAGTGGAGCTTAAACCAAAAGAGCAAACTGTCACAGCAGAGGAGAAACCTGAAAAGATCATCAGTCCAGAGAAAGAAACCCTCAAGGAACCCAGTGATGCAGACAGTTCAGTTAAACCACAAGGAAAGGTGCTCTCAAAACCTGAtgctgaggaagaggagaaacCCTCTGATGTCAAAGTAGAACTGAAGGAAAGTCCCGTAAAGGAAACTGTCAAGCAGGTGAAGACAGAGGAGGATGAACAGCTATCAGACTCGGATAAAGTTGTATCTGAAGATCTTCCAACAGAGGAAGTGGCAAGTCCATTGAAATCAAAAGATGATTCTTCAAAACCTGAAATAACTGCAGATACTAAAGCTGAATCCACAACCCCCTCAAAAGaggagagtgtgagtgagttgAAACCCACAGAGGGCAGCACTGCAGTGTCTGACCAAAGTGAGGCCAGAGCAGTGTCTGCAGACAAGCCCAGCGCATCAGTGGATAAAGCATTAGAAAAGGTCACGGCTACTGTAGAGAAAGTTACAGAGAAAGAATCAGAAGGACCCCAGAAGCCTGAGCCAAGCCCGTCTCCCAAAGCAGAGAGGGAAACTGACAGCACTGCAGATGCCAAAGAAGAGAAGACTGAAGAACCAGGGGTCACCACAATAGCTAAATTGGAGGAGCATGAGGTCAAATCTGAACAGACAGGAGATTCGCAAAAAGTAGAACCCAAACCTCAAGAGTCTGCAACAGACAGCAGGAAGTCAGGTGAAAGCACACCACCAGACAAAGCAGAAGTGAAGCACACAGAGGAGATTCCACAGAAAGAGAAGCCACAGGAAAGAGTAGGCAGGCAAGACTCTGAGGGCAAGGAACAAACAAGTAGCAGCTCTAAAGAGGAAAAGCCTGTTAAGGATTCACTGGTAAAAGACGAgggcaaagaagaaaaaatagtgACCagtgatttgaaagaaaagaaagagccTCAAACAAAGTCAAAGGAAGAAGTCAAACTAGAAATTCAAGAGAACGGCTTTGATGAAAATGAAGCAGCCGTGGAGGAtacaactaaaactaaaacgCAAGAAACAAAAGTACCAGAAAAGGAGCATCATGCTGACCCAGCTAAAGTAATAACAGAACCCATTGCTTCACAGAAAGACATCTAGGATGCGAGAGAAGTTAAATTGATAGACTGCATTAAtggctacatttaaaactgCATGTGCAAAACTAAGCAATATAGCATAATGAATGTATGTGGAGGAAACAAATAAGtcttccaaataaaaaatgaataaatgcttCACAATGCATGCATATTTTGCTTTCAAGGTTAACAATGTTGAATGTAACTAGAagtttaaaatgccaaaatatatatacacattgtgCCATACTTCAATGTAAAAGAGTTAAACTGAGTAATAAAAGTCATTTGCAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002995 True 3406 mRNA 0.46 3 9268917 9273158

Neighbor

gene id symbol gene type direction distance location
AMCG00002994 znf503,LOC107708443,LOC103355656,LOC102798683 coding upstream 112782 9153964 ~ 9156135 (+)
AMCG00002992 LOC108263740,LOC103386992,LOC106613356 coding upstream 450953 8794807 ~ 8817964 (+)
AMCG00002991 kcnma1,LOC102213110,LOC106949528,LOC106919544,LOC107676421,LOC102314531,LOC106517014,LOC108243866 coding upstream 498841 8739738 ~ 8770076 (+)
AMCG00002990 NA coding upstream 626479 8641915 ~ 8642438 (+)
AMCG00002989 dlg5 coding upstream 633640 8584494 ~ 8635277 (+)
AMCG00002997 NA coding downstream 43573 9316731 ~ 9325141 (+)
AMCG00003002 LOC108426803,LOC107743512,LOC107726964,LOC107655430,LOC107559324,LOC107601875 coding downstream 220893 9494051 ~ 9508297 (+)
AMCG00003008 NA coding downstream 289122 9562280 ~ 9575635 (+)
AMCG00003009 LOC108263345,LOC107725471,LOC107666491,LOC107601865,LOC108426813 coding downstream 306441 9579599 ~ 9583885 (+)
AMCG00003007 NA coding downstream 356654 9629812 ~ 9633358 (+)
G140002 NA non-coding upstream 122345 9146301 ~ 9146572 (+)
G139999 c3h10orf11,c13h10orf11,LOC107690203,LOC107747465,LOC107582503,LOC107678567 non-coding upstream 308492 8958739 ~ 8960425 (+)
G139998 NA non-coding upstream 335948 8932750 ~ 8932969 (+)
G139997 NA non-coding upstream 348187 8920468 ~ 8920730 (+)
G139995 NA non-coding upstream 417231 8850179 ~ 8851686 (+)
G140156 NA non-coding downstream 457490 9730648 ~ 9730863 (+)
G140188 NA non-coding downstream 493928 9767086 ~ 9773065 (+)
G140190 NA non-coding downstream 508776 9781934 ~ 9785792 (+)
G140192 NA non-coding downstream 514589 9787747 ~ 9788069 (+)
G140223 NA non-coding downstream 665698 9938856 ~ 9960116 (+)
AMCG00002996 NA other upstream 24818 9236740 ~ 9244099 (+)
AMCG00002982 NA other upstream 771952 8493005 ~ 8496965 (+)
AMCG00002965 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other upstream 1224504 8037577 ~ 8044413 (+)
G139784 NA other upstream 1342085 7923182 ~ 7926832 (+)
AMCG00002960 NA other upstream 1348009 7909252 ~ 7920908 (+)
AMCG00002998 NA other downstream 27153 9300311 ~ 9316633 (+)
G140030 NA other downstream 52330 9325488 ~ 9330464 (+)
G140189 NA other downstream 505092 9778250 ~ 9780452 (+)
AMCG00003019 NA other downstream 571618 9844776 ~ 9853453 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 1407613 10680771 ~ 10683612 (+)

Expression


Co-expression Network