AMCG00003015


Basic Information

Item Value
gene id AMCG00003015
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 9746329 ~ 9750513 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003015
CACATGAAGTATGAAAGCGTGTATAAAAAGATGTGACCAGAGctaatattaaaaatgagaCTGCACGCATTGTTGTGTAGTGCTAAACAATTCAGAGATGTTTTCGATTTCGGCGGCCGAGAAATTGCGCATTGGTTCCCTGGTCACATGGCGAAAGGTCTCAAACAGATGAAAGCCAACCTGAGAAATGTGGACTGTATCATAGAAATCCATGATGCCAGAATATCCTTTaacgTTCTTAAACAGCTGGCTAAGCAAGGTGTGAAGAATGTTGTGTTTACAGACTGCTTACGGCAAAAAGATGAAAATGTGAAGAAGGTAGTTCCTATGGTAACTGAGCTTATTAAGAGCAGCTCTCGATTCCACAGGACGGAGCAGGgtaaAGCTTCCAGAGTTGGGGGAGAACCAGGCATAACCAGAGCAGTTTTAACTAAAATCCAGGTCTGTGAAAGGCCTCTTGTGTATTTGCTAGACACGCCTGGAGTCCTTCCCCCAAGGATAGAAAATATAGAAACTGGAATGAAGTTGGCGCTATGTGGAACTATACTGGACCATTTAGTTGGTGAAGATGTAATTGCTGATTACTTACTGTATACTTTAAACAGGCTAGAGAAATTCAGCTATGTTGATAAGTATGAGCTGGAAGAACCATCTGATGACATTCAGCACATCCTAAAAAGAATTGCTGTGAAGCTGGGAAAAACACAGAGAGTGAAAGCTATCACTGGTGTAGGCGAAGTCACCCTCACCGTGCCAAACTACACGGCTGCTGCTTATGATTTCATCCGAGCTTTCAGGAAAGGAGAGCTTGGCAGGGTGATGATGGACTGATCAACATACCTACAGAACAAGGTTACACTGGAGTGTCTAAGACTGTACATGTCCAAGGTCacttgcatatatttattttgatgggAAGGCACAAAGGATTTCCCAGAGAAATGGGATACGTGTCCCACAATGAACCTTTATTTTTGCAGTAGCACTTTTGCTCCTGAGTTTgtaaaatatcattattttaaatataatgtcaTAATATATTTCTGCTCTTTGTAATTAAATCGCAGTGCACAG

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K19828 MTG1; mitochondrial GTPase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003015 True 1074 mRNA 0.41 10 9746329 9750513

Neighbor

gene id symbol gene type direction distance location
AMCG00003013 echs1,LOC107601864,LOC107676592,LOC107743519,LOC107666378 coding downstream 7079 9736172 ~ 9739250 (-)
AMCG00003014 NA coding downstream 17689 9701635 ~ 9728640 (-)
AMCG00003016 NA coding downstream 108113 9637791 ~ 9638216 (-)
AMCG00003010 gcp2,tubgcp2,LOC106589265 coding downstream 116643 9621880 ~ 9629686 (-)
AMCG00003012 NA coding downstream 125289 9607782 ~ 9621040 (-)
AMCG00003011 NA coding upstream 672 9751185 ~ 9758202 (-)
AMCG00003021 NA coding upstream 12383 9762896 ~ 9773347 (-)
AMCG00003022 NA coding upstream 41334 9791847 ~ 9792269 (-)
AMCG00003029 NA coding upstream 184898 9935411 ~ 9941910 (-)
AMCG00003028 NA coding upstream 191543 9942056 ~ 9945940 (-)
G140174 NA non-coding downstream 5389 9740654 ~ 9740940 (-)
G140093 NA non-coding downstream 205776 9540344 ~ 9540553 (-)
G140016 NA non-coding downstream 503342 9237868 ~ 9242987 (-)
G140014 NA non-coding downstream 510027 9236022 ~ 9236302 (-)
G140009 znf503,LOC107708443,LOC101070189 non-coding downstream 589767 9150816 ~ 9156562 (-)
G140199 NA non-coding upstream 15140 9765653 ~ 9771507 (-)
G140217 NA non-coding upstream 98382 9848895 ~ 9853413 (-)
G140228 NA non-coding upstream 138645 9889158 ~ 9889626 (-)
G140279 NA non-coding upstream 285665 10036178 ~ 10037857 (-)
G140368 NA non-coding upstream 471267 10221780 ~ 10339260 (-)
AMCG00003017 NA other downstream 139013 9596943 ~ 9607316 (-)
G140015 NA other downstream 508599 9236658 ~ 9237730 (-)
G140006 NA other downstream 898489 8847032 ~ 8847840 (-)
G139933 LOC108443181 other downstream 1251733 8485361 ~ 8494596 (-)
AMCG00002970 cj104,anapc16 other downstream 1808088 7931166 ~ 7938241 (-)
AMCG00003049 NA other upstream 551287 10301800 ~ 10331372 (-)
AMCG00003110 LOC107699307,LOC108442385,LOC108263686,LOC107727357,LOC105890865,LOC104955882 other upstream 1857950 11608463 ~ 11622649 (-)
G140758 NA other upstream 1890303 11640816 ~ 11647619 (-)
G140757 NA other upstream 1943493 11694006 ~ 11733762 (-)
AMCG00003138 NA other upstream 2977725 12728238 ~ 12739807 (-)

Expression


Co-expression Network