AMCG00003025


Basic Information

Item Value
gene id AMCG00003025
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 9996566 ~ 9997258 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003025
ATGACAATTGATGGAAAGCGCCGACTTGACCTCAGCAACATGGGCATTGCTACCTTCCCCAAATGCATCCTGAAATTGGCTGATGTGGATGAGCTTGACCTGAGCAGAAACATGTTGAAGAAGATCCCAGACTACATCGACAAGTTCCAGAACCTGCGCTGGCTGGACTTCCACAGCAACAAAATCGAACATCTTCCAGATACCATAGGACAGCTCAAAAATCTTTATTACCTCAACCTCTGCAACAACAAACTGACGTCTACCAATCTCCCCGTCGAGATAGGCCAGCTGAAGAACCTGCGCATTTTGAACCTTGGAATGAATTACATCGAATGCCTTCCTTCGTCTATTGCTGCTCTCAAAGAGCTACAGGAACTTGGCTTGTTCGACAACAGCCTAACCGGTCTGCCAGAGATCATTGTGAAACTTCCCAAACTGAAGAAAGTAAACACAACACGCAACCCACTACCTAAGCCTGATGACGACCAAGATTTAGACACCATCAAGCGAGTAGAAAGTCTGTATTTAGTGAATGAGGCAGGTCTGTGCAGGCCTTGTAGCAATAAATGTAAAGATGAAAGGGATAGATTAAACAAACTAAGGAGCTCAGCCCCTTCACAGAAGAAGTCAAATTTCTCTGGGCTGCTAACACCAAACTCAACTGCCCAGGAAACTCAAGCGCTGTGGAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003025 True 693 mRNA 0.46 1 9996566 9997258

Neighbor

gene id symbol gene type direction distance location
AMCG00003026 NA coding upstream 19904 9965956 ~ 9976662 (+)
AMCG00003024 drgx,LOC107548637,LOC107673892,LOC107588616,LOC107708289,LOC107668808 coding upstream 59185 9929439 ~ 9937381 (+)
AMCG00003023 LOC107552681 coding upstream 70542 9923681 ~ 9926024 (+)
AMCG00003020 NA coding upstream 76022 9901267 ~ 9920544 (+)
AMCG00003018 NA coding upstream 253727 9742438 ~ 9742839 (+)
AMCG00003032 NA coding downstream 36666 10033924 ~ 10038457 (+)
AMCG00003033 arhgap22,LOC108443345,LOC103382122 coding downstream 49479 10046737 ~ 10048774 (+)
AMCG00003031 NA coding downstream 70863 10068121 ~ 10077255 (+)
AMCG00003034 NA coding downstream 101201 10098459 ~ 10128943 (+)
AMCG00003035 NA coding downstream 166825 10164083 ~ 10166896 (+)
G140250 NA non-coding upstream 17121 9979232 ~ 9979445 (+)
G140223 NA non-coding upstream 36450 9938856 ~ 9960116 (+)
G140192 NA non-coding upstream 208497 9787747 ~ 9788069 (+)
G140190 NA non-coding upstream 210774 9781934 ~ 9785792 (+)
G140188 NA non-coding upstream 223501 9767086 ~ 9773065 (+)
G140260 NA non-coding downstream 5574 10002832 ~ 10003519 (+)
G140263 NA non-coding downstream 20720 10017978 ~ 10018198 (+)
G140264 NA non-coding downstream 21347 10018605 ~ 10018823 (+)
G140265 NA non-coding downstream 22157 10019415 ~ 10019619 (+)
G140266 NA non-coding downstream 23566 10020824 ~ 10021457 (+)
AMCG00003019 NA other upstream 143113 9844776 ~ 9853453 (+)
G140189 NA other upstream 216114 9778250 ~ 9780452 (+)
G140030 NA other upstream 666102 9325488 ~ 9330464 (+)
AMCG00002998 NA other upstream 679933 9300311 ~ 9316633 (+)
AMCG00002996 NA other upstream 752467 9236740 ~ 9244099 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 683513 10680771 ~ 10683612 (+)
G140478 nkx23,LOC106591187,LOC101065636,LOC101073339,LOC101063040,LOC104962797 other downstream 757643 10754901 ~ 10756840 (+)
G140613 NA other downstream 1212315 11209573 ~ 11212111 (+)
G140693 NA other downstream 1488933 11486191 ~ 11487884 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other downstream 2374741 12371999 ~ 12678159 (+)

Expression


Co-expression Network