AMCG00003026


Basic Information

Item Value
gene id AMCG00003026
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 9965956 ~ 9976662 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003026
aacaaagccCAACTGGCTGCGTTTCATGTAGGTCCAGCTGGAAATCTGTGTAGGTTCCAACTACTGCACAGGAAATGACATTTCCTACATTTTGCAGGAGAGGAGTGATTAAGGAGGGAGGGTGTTTCTAACTGGGAACAGAACAAGTACTGTTTCATATTacaaaaacgaaaaaaaaaaaaaagaaaaagaaaaatcctggGACTCCTTTCGTTAAGACGTTTAGCTGAGTTTATGGAGCCTGTGTgcctgaaaaatgaaaatctccTCAGTGGTCATAGTTCTCCTGACTAGAGTTTTAATTGGAGaagtGTGTGAGGCCCTGAATGTGACGGTCTCCCCTGGACCAGTCATAGTGTCGGCCGAGGGTGAAAATGTCACTCTCTCCTGCGATATCTCTCAGAAGAAGAAACCCAACAGTCTCTTAGTTGTCCGCTGGGTGTTCTCTCTTGTATCGGACACAGAGCATCTGATTGTCAAAATGAATATGAGACGAGTGCAGATGTACGGGAATTACACAACACGCTTCAACCAACAAAAGCTCAAGTTCGTTGAAGTAACAGAGGGCAAAACCTTTGATTTAATCATTCTGAACATTTCCAGAGAAGACAAAGGTCATTATATATGTAAAGTCCAGGAAATCAGAAAGCACCGGAATAGATGGCGAGCCTCTTCCAATGGCACAGCAACTACAGAACTAAGAGTGCACGTTTTACCAGCTGTGAAGAGCAATGCTGGAATATGGCGTCTTTTTGAAGACGTGTacctctgtgctgtgctgataTGCTCTATCGGTATTATATGCATGTTTCTGTTCACGGTAATCCTCATCTGCCAATGCCTGCACAAAAAACGAAGATTAAAAGCAAGTTATTATTTGGTCAAATGTCCACAGAACAGCTCAGGAGAGACTGTAACTAGTGTTGTTAGCTCATCGCCTATGCtgccaaagaaacaaaagaaatacaaacggaaaaaatataaagaaaatgctgATGTTCCACCTGAAATACCAGCaaaagTTCCCATTGCCGATACGCCCAGAAGGCCCAGACTTCTAAAAGCACAACCAAGGAAAGTGGTGCTGCCCAAAATTGCAGAAGAAAGCTTAACGTATGCAGAATTGGAGCTTGTTAAGACCCAACCAGAGAGCAAAGCAGTTTGCACAGGCACCGTCTATGCACAAATCCTGTTCGAAGAGAGACAactgtaaatatacacataccATTATGGGATTCAAaccattaatttatataaaatctattttattgtttttaattacatttatgtatgtattttactgatgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagtgtatatatatgtgttccttgttttctattttattttgtaacaattacTTTATTGGAAGAATAATGCtctgaaagaataaaacaagatcctattttttttttttaatccgaTGTCAAATGTTTGCATGTATGCATTATAAGActcctgacttttttttttaaccaaaggAATGAAGGATAACTATTCAATTTTTATCTTAATTGCATGTAATGTAAAActgtgatttataatttattcagtttaaaatattttcttttttttgttttaatccttcTGTGATGAAAGGAATGACCTAATGCAAACAGAAAATCTACATAATAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003026 True 1667 mRNA 0.38 8 9965956 9976662

Neighbor

gene id symbol gene type direction distance location
AMCG00003024 drgx,LOC107548637,LOC107673892,LOC107588616,LOC107708289,LOC107668808 coding upstream 28575 9929439 ~ 9937381 (+)
AMCG00003023 LOC107552681 coding upstream 39932 9923681 ~ 9926024 (+)
AMCG00003020 NA coding upstream 45412 9901267 ~ 9920544 (+)
AMCG00003018 NA coding upstream 223117 9742438 ~ 9742839 (+)
AMCG00003007 NA coding upstream 332598 9629812 ~ 9633358 (+)
AMCG00003025 NA coding downstream 19904 9996566 ~ 9997258 (+)
AMCG00003032 NA coding downstream 57262 10033924 ~ 10038457 (+)
AMCG00003033 arhgap22,LOC108443345,LOC103382122 coding downstream 70075 10046737 ~ 10048774 (+)
AMCG00003031 NA coding downstream 91459 10068121 ~ 10077255 (+)
AMCG00003034 NA coding downstream 121797 10098459 ~ 10128943 (+)
G140223 NA non-coding upstream 5840 9938856 ~ 9960116 (+)
G140192 NA non-coding upstream 177887 9787747 ~ 9788069 (+)
G140190 NA non-coding upstream 180164 9781934 ~ 9785792 (+)
G140188 NA non-coding upstream 192891 9767086 ~ 9773065 (+)
G140156 NA non-coding upstream 235093 9730648 ~ 9730863 (+)
G140250 NA non-coding downstream 2570 9979232 ~ 9979445 (+)
G140260 NA non-coding downstream 26170 10002832 ~ 10003519 (+)
G140263 NA non-coding downstream 41316 10017978 ~ 10018198 (+)
G140264 NA non-coding downstream 41943 10018605 ~ 10018823 (+)
G140265 NA non-coding downstream 42753 10019415 ~ 10019619 (+)
AMCG00003019 NA other upstream 112503 9844776 ~ 9853453 (+)
G140189 NA other upstream 185504 9778250 ~ 9780452 (+)
G140030 NA other upstream 635492 9325488 ~ 9330464 (+)
AMCG00002998 NA other upstream 649323 9300311 ~ 9316633 (+)
AMCG00002996 NA other upstream 721857 9236740 ~ 9244099 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 704109 10680771 ~ 10683612 (+)
G140478 nkx23,LOC106591187,LOC101065636,LOC101073339,LOC101063040,LOC104962797 other downstream 778239 10754901 ~ 10756840 (+)
G140613 NA other downstream 1232911 11209573 ~ 11212111 (+)
G140693 NA other downstream 1509529 11486191 ~ 11487884 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other downstream 2395337 12371999 ~ 12678159 (+)

Expression


Co-expression Network