AMCG00003032


Basic Information

Item Value
gene id AMCG00003032
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 10033924 ~ 10038457 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003032
ATGCATCCTTCCCCCGCATACGCCATATTTGAAGTCGCTCAAAGGGGAAACGTGGAGGAGTGCGAGAGGGTCGTCCAGCTGGACCGCTCTCTCCTGACACGCAGAGGTTGGAGTGGGTTCACCCCACTTCATTATGCTGCATTTCAGGGGAACAGGAAACTAAGCGAACTGTTCCTAAAAAATGGAGCTGACCCCAACATACCAAGTGATGCCGGGCAAACAGCTTTTCATCTTTCTTGTAGGCATGGTGACGTGTATGTAATCCATCTGATGCTGAAACATGGAGCAGATCTGAGCATTGTTGATCACCAGGGGAAAACAGCACTTCACCAGTCAGTCTCCGGGGGTAATATAATTGCTATAAGGTACATAGAGGATACTGGGGTCTTCAGTTTTTCGGACACAGATAAGTTTTTAGTCAATCCCCTGCACCTCGCGGTGTCAACTGGAAACATCGATGTCGTGAAGTACTTACTGAGaaacaatAGGTGTCAAGCACATGCTGCTGACAATCAGGGTATGACTGCCATGCATGTAGCGGCTGAGAGAGGAGCAATAGAAATAAGCTGGATATTGTTGCAGCAGTTTGGGTTTCAGctcctgcatttaaaaaacaagggtGGACTTACCCCAGTTGACCTTTGTAGGCAAGGAACAACATACAGACATAAACAACTTACAAAGATTTTATGTGACTTCATCAACCAACCAGTGGAGCAGAAACCTAAAGCTTCTTATGGCATGTACTACTGGGCCCTTCTGTTCCCTGCCATCAGTGGATCGATTGTCCTCCTGATTGCGGCAGTACTGGGAAAATACGGGGGGATATTTTGTGGGCTGGTATTCCCTTCACTGGCAAAGAGCATTTTCTCACAATATCACAGAATGAACAGCTACCAGAGGCTGCCAAATCCTATCTATCTTGGTACATTTGCAGCTGGCATATTTCATTCATTGCTGTGCTTCTTCCACAAGATCATGCCAAATATCCTTTGCAATAACATTTCCTTGACTCCAATACTTATTTCTCCTGTCAATGCATTGCTCCTGATGTCCGTCACCCACTTCACAGCGATGCTCTGGATGTTCCGTCTGGTTCTGACAAAAGATCCAGGGCGGTTACGAAGAGCTGACACTGACTCAAAGTTTACAACAATTGCCGAGCTTGTCGAAGCAAACCAGAACCCGTACAAGTTCTGCATTCATTGTGAGATGATCCAACCAGACAAATCCAGGCACTGTAAACTTTGCAACATCTGTGTACTTGAATATGACCACCACTGTCTTTTTCTAAACAACTGTGTGGCAAAGAATAACCATCGGATCTTCGTTATCTTCATAATGGAGTTAATAGTTGCACATGTGATCTTTATCGTGTCGGCACTTTATTACATATACCTGAAGTACAATCGGCCTTTCTTGACTGTGTGGACAACAGTTATTAGTGAAGAAGTGTGGGTGTTGGTTCTGACTGTAATGAACGCCTTTACACTGATTTGGGAAAGCTGGCTCCTTAAAGAACAGTTTGAAGCAATATCAATGGGCACCACTACATACTTCAAACAAAACTCTGACAGACGTTACTCCCGGAGCTTGCGATGCcgaacattttttatgtttctaattGAAGACAAAAGGAGACACGATTTCCAGCTAGAGAGATCTATAGACATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003032 True 1677 mRNA 0.44 10 10033924 10038457

Neighbor

gene id symbol gene type direction distance location
AMCG00003025 NA coding upstream 36666 9996566 ~ 9997258 (+)
AMCG00003026 NA coding upstream 57262 9965956 ~ 9976662 (+)
AMCG00003024 drgx,LOC107548637,LOC107673892,LOC107588616,LOC107708289,LOC107668808 coding upstream 96543 9929439 ~ 9937381 (+)
AMCG00003023 LOC107552681 coding upstream 107900 9923681 ~ 9926024 (+)
AMCG00003020 NA coding upstream 113380 9901267 ~ 9920544 (+)
AMCG00003033 arhgap22,LOC108443345,LOC103382122 coding downstream 8280 10046737 ~ 10048774 (+)
AMCG00003031 NA coding downstream 29664 10068121 ~ 10077255 (+)
AMCG00003034 NA coding downstream 60002 10098459 ~ 10128943 (+)
AMCG00003035 NA coding downstream 125626 10164083 ~ 10166896 (+)
AMCG00003036 NA coding downstream 131049 10169506 ~ 10171361 (+)
G140269 NA non-coding upstream 3401 10030226 ~ 10030523 (+)
G140268 NA non-coding upstream 8775 10024939 ~ 10025149 (+)
G140266 NA non-coding upstream 12467 10020824 ~ 10021457 (+)
G140265 NA non-coding upstream 14305 10019415 ~ 10019619 (+)
G140264 NA non-coding upstream 15101 10018605 ~ 10018823 (+)
G140331 NA non-coding downstream 196378 10234835 ~ 10237083 (+)
G140340 ubtd1b,LOC106578996 non-coding downstream 209378 10247835 ~ 10251525 (+)
G140351 NA non-coding downstream 249980 10288437 ~ 10289935 (+)
G140434 NA non-coding downstream 586306 10624763 ~ 10627882 (+)
G140435 loxl4,LOC103368016 non-coding downstream 593806 10632263 ~ 10632489 (+)
AMCG00003019 NA other upstream 180471 9844776 ~ 9853453 (+)
G140189 NA other upstream 253472 9778250 ~ 9780452 (+)
G140030 NA other upstream 703460 9325488 ~ 9330464 (+)
AMCG00002998 NA other upstream 717291 9300311 ~ 9316633 (+)
AMCG00002996 NA other upstream 789825 9236740 ~ 9244099 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 642314 10680771 ~ 10683612 (+)
G140478 nkx23,LOC106591187,LOC101065636,LOC101073339,LOC101063040,LOC104962797 other downstream 716444 10754901 ~ 10756840 (+)
G140613 NA other downstream 1171116 11209573 ~ 11212111 (+)
G140693 NA other downstream 1447734 11486191 ~ 11487884 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other downstream 2333542 12371999 ~ 12678159 (+)

Expression


Co-expression Network