AMCG00003035


Basic Information

Item Value
gene id AMCG00003035
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 10164083 ~ 10166896 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003035
ATGGCAGTTCAATTCGTCTTACTTGCTCATCTAGTTTTCTTCCTGGGATACGCAAACTTCGCAACAACTGCAGCACAAGAGATGCCCAGACCTGCGCAGGAGAGCGGCGCTTCGGACCCGCCAGCGGATCACCCGGCTGACAGTTCAGCACCTGACAGCTCAGCTCAGGACATGGTGGCCATTCACATGTTCAAACTGTATGAGAAGTATAACAGAGAAGTCAACCGACCAAGAGACGGGAACACCGTGAGGAGCTTCAAGGCAAGCCTGGCAATCTCAGAGCAGAAGGTTTTGTACCACTTCAATCTGACTTCTCTTCAGGAGTCAGAAGTTATTCTTGCTGCCACATTCCACTTCTTCTTTGACAAGCGCCCGCGACAGAAATTTTGGTTCTGCAAACGTTTCAAAAACCCATCTTGTCGCATCCAGCAACTTCACCAGCTGCCTTCACTGAACCTCATCTTCAGAAATGCTTCTTCAAGCGTTGCTTCTGGAACAGTGTTGGGAAACATCACCATTTTTCCAAACAGACGAGGATCCTGGCAGTCAAAGgatatatttcaaatgctcAAAGAAGCCAAGACAACAGATGAACTCTTACTAACAGCTGAATTCGATTTTGGTGAAAAATACCAAAAGTACCAAGATCACATTTCACCTTCCAGTCTTCCATACATCCTGGTGTATGCTAATGACTTGTCAATATCTGAACCCAACAGTGTCGCTGTGTCCTTGCAAAGGTATGACCCTTTCTCTGTCAATGAAGAGACTACCCAGTCCCCGAATTCTTCTCCTGATGGCCGAGTGAAGAGGGACACGCATTTCCCAGACCACATCCAGAACAATGAACTTCCTGAAGTAGAGTACAATACATTCAAGAAGCACGAGCTATGGGAAAGTGCGTATATGGCTCTGAAGCCCAAATCGCCCAAAAAAGACCGCAGGAGAAAAGGGCAGGAGAACAGTGATGGAATAACCAAGTCCCAGGTCCTCAGCTTTGATGAGAAAACCATGAAAAAAGCCCGGCGAAGGCAGTGGAATGAGCCACGCATCTGCTCTAGAAGATACCTGAAAGTGGACTTTGCAGATATCGGCTGGAGTGAGTGGATTTTATCCCCAAAGTCATTTGATGCCTACTACTGTGCAGGCACCTGTGAATTCCCAATGCCCAAGGTGGTTCGCCCCTCTAATCATGCAACCATTCAGAGCATTGTGAAGGCAGTGGGTATTATTCCAGGAGTCCCTGAGCCCTGCTGTGTCCCAGACAAAATGAATTCTCTCAGTGTCCTTTTCTTGGACGAGAATAAAAACGTGGTGTTAAAGATTTACCCCAACATGTCTGTGGAGTCCTGCGCATGTCGATAG

Function

GO: NA

KEGG:

id description
K22674 GDF10, BMP3B; growth differentiation factor 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003035 True 1365 mRNA 0.47 3 10164083 10166896

Neighbor

gene id symbol gene type direction distance location
AMCG00003034 NA coding upstream 35140 10098459 ~ 10128943 (+)
AMCG00003031 NA coding upstream 86828 10068121 ~ 10077255 (+)
AMCG00003033 arhgap22,LOC108443345,LOC103382122 coding upstream 115309 10046737 ~ 10048774 (+)
AMCG00003032 NA coding upstream 125626 10033924 ~ 10038457 (+)
AMCG00003025 NA coding upstream 166825 9996566 ~ 9997258 (+)
AMCG00003036 NA coding downstream 2610 10169506 ~ 10171361 (+)
AMCG00003030 NA coding downstream 9746 10176642 ~ 10181642 (+)
AMCG00003043 antxr1c,LOC105893913,LOC107708998,LOC107693662,LOC107720085,LOC107653967 coding downstream 28641 10195537 ~ 10226031 (+)
AMCG00003044 NA coding downstream 94444 10261340 ~ 10286055 (+)
AMCG00003045 NA coding downstream 119259 10286155 ~ 10288094 (+)
G140269 NA non-coding upstream 133560 10030226 ~ 10030523 (+)
G140268 NA non-coding upstream 138934 10024939 ~ 10025149 (+)
G140266 NA non-coding upstream 142626 10020824 ~ 10021457 (+)
G140265 NA non-coding upstream 144464 10019415 ~ 10019619 (+)
G140264 NA non-coding upstream 145260 10018605 ~ 10018823 (+)
G140331 NA non-coding downstream 67939 10234835 ~ 10237083 (+)
G140340 ubtd1b,LOC106578996 non-coding downstream 80939 10247835 ~ 10251525 (+)
G140351 NA non-coding downstream 121541 10288437 ~ 10289935 (+)
G140434 NA non-coding downstream 457867 10624763 ~ 10627882 (+)
G140435 loxl4,LOC103368016 non-coding downstream 465367 10632263 ~ 10632489 (+)
AMCG00003019 NA other upstream 310630 9844776 ~ 9853453 (+)
G140189 NA other upstream 383631 9778250 ~ 9780452 (+)
G140030 NA other upstream 833619 9325488 ~ 9330464 (+)
AMCG00002998 NA other upstream 847450 9300311 ~ 9316633 (+)
AMCG00002996 NA other upstream 919984 9236740 ~ 9244099 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 513875 10680771 ~ 10683612 (+)
G140478 nkx23,LOC106591187,LOC101065636,LOC101073339,LOC101063040,LOC104962797 other downstream 588005 10754901 ~ 10756840 (+)
G140613 NA other downstream 1042677 11209573 ~ 11212111 (+)
G140693 NA other downstream 1319295 11486191 ~ 11487884 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other downstream 2205103 12371999 ~ 12678159 (+)

Expression


Co-expression Network