AMCG00003067


Basic Information

Item Value
gene id AMCG00003067
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 10694592 ~ 10700613 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003067
cacacacacacacacacacacacacacacactgtactgtagtacacagtttaatgtacGTGTTCCTTGTTTGTGATTGTCTGccatttttgtttgctgtgaaacaggaagtggagGTCGATAAGCCGTCTGTCCGCCGTGATTTGCAATAGCTAAATGAACAAACCGTTGGCTTTTCAAAACTTCTCGATCGCTTTGTTAACCACTACCAGTAATGTCCGCGTTTGAGTGGTGCTGTGTGAGAGACACGTAGTCTGCTCTGAAGTGCTTGCCTTTCTTTGCATGTCCTGTCCTGCCACAGTCCGCGTAAGACCGGCGAGTCCGGGGAACAGAGCAGCTGCGGCCACGTCGTCAGGGACCATGAGGAGGTGACAGTGACAGCCTGGACATATGGCAAGGCTCAGTTTCTCCTGCCTCCTGCCAGCTTCCTGGCACTTCAGCGTGTCCCCGTTCTCTCTGGGAGTCACACCACGCCAACGCCTTGTCTTCCTGGCCTTCTTCCTGGCCTGCTTCCTGCTGCTGTTCCTGGCCATGCTGCATACACACCGCTGGAGCCCGGCGCACAGGGCTGGCCAGCTAGACAAGTATATGTCCATTATTGAGACTATGGAGGCCACTGACATTGCCAATCCGAGCCTGAACTTCGGAGTAGTGGTGGATTGTGGCAGCAGTGGTTCACGAGTCTTTGTCTACTACTGGCCCCCCCACAATGGAAACCCCCACTCACTGCTCGACATCCGGCAGATGAGGGACCACAACCGTACCCCGGTGGTCAAGAAAATCAAACCAGGTATATCCACTCTGGCCCACACCCCTGACAAAGCCAGCGATTATCTCCAACCTCTCCTGAAGTTCGCAGCTGAACACATCCCCAAAAAGAAGCACAAAGAGACACCTCTGTATATCCTATGCACAGCGGGAATGAGGCTGCTGTCAGAGAGCCAGCAGGGGGCAATCCTGAAGGATCTGTTCACAGATGTGCCCCTCGAGTTTGATTTCCTGTTTTCCAGCTCCCATGCGGAGGTCATCTCCGGAAAACAGGAAGGAGTGTATGCATGGATTGGTATTAACTTTGTGCTTGGCCGCTTTGACCACGCAGAAGAGGGGGATGATGCTGTGGTTGCCGTTTCAACTGGAACACAAAACCAACAGCCAATCAGCCGCAAGCGCACAGTGGGCATTATTGACATGGGTGGGGCCTCGCTGCAAATCGCATATGAGGTGCCCAGTGCGATTACCTTCAGCTCACCTGAGCAGGAAAACGCGGCAAAGACCCTGCTGGCTGAGTTTAACCTGGGCTGCGATGTTGAGCACACTCAGCACGTCTACCGCGTCTATGTCACCACTTTCTTGGGCTTCGGAGGCAATATGGCCCGGCAGCGCTATGAGGACTTCCTGGTCAACAGGACGGTCTCCAGGAGCAGGTTAACAGGTGATCAGACTGGGATAAGTGCCTCCAGCCCTTACTCCGACCCCTGCCTGCCCGTCGGCCTGGAAGACTCGGTGCAGCGCGATGAGCAGACGGTGTTCCTGCGTGGCCACGGGGACTGGCTTAAGTGCCAGGAAGTTGTGCGGCCCTTCCTGGGACAGCCCAACACCTCCGCCTCCCTCCTGAGGGTGTATCGGGCCCCCGTGGACTTCCACAACAGCGAGTTCTACGGCTTCTCCGAGTTCTACTACTGCACGGAGGACGTGCTGCGGATCGGGGGCAACTATGACAGCGCCAAGTACGCCAGAGCCGCCAGGGATTATTGTGCCACCAAGTGGTCAACCCTAACACAGCGACTGGACAGCAAACTCTACTCCTCTCAGGCTGATATCTCCAGATTAAAATACCAGTGCTTTAAATCTGCATGGATGTATGAAGTGCTGCACTCTGGATTTAAATTTCCTAAGGATTATCCCAGCTTGAAGACTGCACAGCTGGTCTATGACAAAGAGGTGCAGTGGACTCTGGGGGCTATTCTCTTTAAAACACGTTTCCTGCCTCTCAGGGACCTTCAGCAGGAGGCATTCCGCCCGTCTCATTCCAGCTGGCCGCGCTTCTCATTCGTTTATAACCACTACCTGTTCCTCGCCTGCATCCTGGTGGTGCTCTTGGCCATCCTGCTCTACATCCTGCGCCTCCGACGCATCCACCGGCGAGAGCAGCGCCAGGCCGAGACTCTGGACCTGCTGTGGGTGGAGGAGGGCGAGCCTCTCACTGGCTGAGGACGGGAGGGGTGCCGGAGCCACGTCTCCTCAGGGTCCCTGGGCTGCTACTGCTTTGAGGGGAACCTGAAGTTCTACTGCCTGTTTACCAGAAGATGCACAGAGGTGGTTACATCGTAAAGGAGTTTGAGAAGGACTAGGGTGATGTACAGGTTTGGGAAAAGACCACCAGATGATGAAAACTGAATCACTTTAGATCTGCATCTCTTTCTGCAGATCACCCAATTATTCCATTTCAGGAATGACTGgatcttaattttaaattattaaatgagg

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K14643 ENTPD7; ectonucleoside triphosphate diphosphohydrolase 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003067 True 2486 mRNA 0.54 12 10694592 10700613

Neighbor

gene id symbol gene type direction distance location
AMCG00003061 NA coding downstream 14760 10670505 ~ 10679832 (-)
AMCG00003062 NA coding downstream 32489 10657061 ~ 10662103 (-)
AMCG00003059 NA coding downstream 46682 10624960 ~ 10647910 (-)
AMCG00003060 crtac1,LOC107832886,LOC106964415 coding downstream 93941 10581393 ~ 10600651 (-)
AMCG00003063 NA coding downstream 116489 10574632 ~ 10578103 (-)
AMCG00003068 NA coding upstream 30329 10730942 ~ 10743690 (-)
AMCG00003069 nkx23,LOC106591187 coding upstream 55528 10756141 ~ 10758646 (-)
AMCG00003071 LOC106591176,LOC103370034,LOC106591308,LOC103383202 coding upstream 93441 10794054 ~ 10807733 (-)
AMCG00003080 NA coding upstream 207379 10907992 ~ 10912581 (-)
AMCG00003078 NA coding upstream 218536 10919149 ~ 10923578 (-)
G140458 NA non-coding downstream 37595 10653325 ~ 10656997 (-)
G140456 NA non-coding downstream 70850 10622606 ~ 10623742 (-)
G140368 NA non-coding downstream 355332 10221780 ~ 10339260 (-)
G140279 NA non-coding downstream 656735 10036178 ~ 10037857 (-)
G140228 NA non-coding downstream 804966 9889158 ~ 9889626 (-)
G140521 NA non-coding upstream 118156 10818769 ~ 10819159 (-)
G140537 NA non-coding upstream 225505 10926118 ~ 10929972 (-)
G140546 NA non-coding upstream 264919 10965532 ~ 10967602 (-)
G140567 NA non-coding upstream 310525 11011138 ~ 11037311 (-)
G140588 NA non-coding upstream 406783 11107396 ~ 11107604 (-)
AMCG00003049 NA other downstream 363220 10301800 ~ 10331372 (-)
AMCG00003017 NA other downstream 1087276 9596943 ~ 9607316 (-)
G140015 NA other downstream 1456862 9236658 ~ 9237730 (-)
G140006 NA other downstream 1846752 8847032 ~ 8847840 (-)
G139933 LOC108443181 other downstream 2199996 8485361 ~ 8494596 (-)
AMCG00003110 LOC107699307,LOC108442385,LOC108263686,LOC107727357,LOC105890865,LOC104955882 other upstream 907850 11608463 ~ 11622649 (-)
G140758 NA other upstream 940203 11640816 ~ 11647619 (-)
G140757 NA other upstream 993393 11694006 ~ 11733762 (-)
AMCG00003138 NA other upstream 2027625 12728238 ~ 12739807 (-)
AMCG00003144 NA other upstream 2150408 12851021 ~ 12855341 (-)

Expression


Co-expression Network