Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003153 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 13012461 ~ 13012970 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003153 | True | 261 | mRNA | 0.54 | 2 | 13012461 | 13012970 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003152 | NA | coding | downstream | 25689 | 12986350 ~ 12986772 (-) |
| AMCG00003148 | NA | coding | downstream | 41227 | 12919809 ~ 12971234 (-) |
| AMCG00003147 | NA | coding | downstream | 96092 | 12905540 ~ 12916369 (-) |
| AMCG00003146 | herc4 | coding | downstream | 113316 | 12878809 ~ 12899145 (-) |
| AMCG00003143 | NA | coding | downstream | 143137 | 12862295 ~ 12869324 (-) |
| AMCG00003159 | NA | coding | upstream | 34366 | 13047336 ~ 13105397 (-) |
| AMCG00003161 | LOC108273829,LOC107561852 | coding | upstream | 275254 | 13288224 ~ 13341765 (-) |
| AMCG00003165 | NA | coding | upstream | 383413 | 13396383 ~ 13405197 (-) |
| AMCG00003173 | NA | coding | upstream | 784105 | 13797075 ~ 13811136 (-) |
| AMCG00003174 | gdh01,gdh3.2,glud1 | coding | upstream | 835540 | 13848510 ~ 13871340 (-) |
| G140971 | NA | non-coding | downstream | 181535 | 12821902 ~ 12830926 (-) |
| G140906 | NA | non-coding | downstream | 406509 | 12605752 ~ 12605952 (-) |
| G140904 | NA | non-coding | downstream | 409430 | 12602822 ~ 12603031 (-) |
| G140883 | NA | non-coding | downstream | 650257 | 12357446 ~ 12362204 (-) |
| G140763 | LOC106513751,LOC103376442,LOC107375490 | non-coding | downstream | 1215447 | 11795976 ~ 11797014 (-) |
| G141175 | NA | non-coding | upstream | 547549 | 13560519 ~ 13560839 (-) |
| G141201 | NA | non-coding | upstream | 752986 | 13765956 ~ 13836294 (-) |
| G141219 | LOC108273954,LOC108438198,LOC107550059,LOC107601819,LOC106904390 | non-coding | upstream | 810444 | 13823414 ~ 13834549 (-) |
| G141221 | NA | non-coding | upstream | 830209 | 13843179 ~ 13843471 (-) |
| G141225 | NA | non-coding | upstream | 832980 | 13845950 ~ 13846159 (-) |
| G141004 | NA | other | downstream | 133040 | 12861426 ~ 12879421 (-) |
| AMCG00003144 | NA | other | downstream | 157120 | 12851021 ~ 12855341 (-) |
| AMCG00003138 | NA | other | downstream | 272654 | 12728238 ~ 12739807 (-) |
| G140757 | NA | other | downstream | 1278699 | 11694006 ~ 11733762 (-) |
| G140758 | NA | other | downstream | 1364842 | 11640816 ~ 11647619 (-) |
| AMCG00003164 | sec24c | other | upstream | 394302 | 13407272 ~ 13430324 (-) |
| AMCG00003214 | phs,pcbd1,LOC107743500,LOC107601888 | other | upstream | 1656445 | 14669415 ~ 14674420 (-) |
| AMCG00003231 | NA | other | upstream | 2043673 | 15056643 ~ 15140819 (-) |
| G141826 | NA | other | upstream | 3735091 | 16748061 ~ 16748431 (-) |
| AMCG00003320 | NA | other | upstream | 6530667 | 19543637 ~ 19569615 (-) |
