AMCG00003165


Basic Information

Item Value
gene id AMCG00003165
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 13396383 ~ 13405197 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003165
ATGGCGGGGGTCCGGGGTCCTGGCTTTCCCTTGCTCAGTGTGGCTGCCCTGGGCTGCTTGTCCTGGATGGGTCTGGGCTGGACTCAGGATGACCTGCGTTTGGGGGGACCGGGTCCTGCCCCTCAGCCCCACCTCATCTTCATCATGGTGGACGACCAAGGCTACTGTGACATAGGCTACCATGGGTCAGAGATCGCCAAACCTGTCCTGGACAACCTGGCAAATGAGGGGGTCAAACTGGAGAACTACTACGTGCAGCCCCTCTGTTTGCCCTCCTGCAGTCAGCTCATGACCGGACGGTATCAGATCCACACTGGGCTCCAGGACTCCATCATCCTGCCCCGCCTGCCCCTCTGCCTGCCCCTGGACACCCCCACCTTGGCCGAGCGCCTGAGAGAAGCGGGCTACGCCACGCATATGGTGGGGAAGTGGCACCTGGGCTTCTGTCGCCCGCAATGCCTGCCCACCGGCCGTGGATTCCAATCTTTCCTGGGGTCCCTGATGGGCAGCGGGGACCACTTCACCTCCCACAACTGCGACAGCTCCGAGGTGTGCGGCTTCGACCTGCACGACGGCCCCCAACCGGCCTGGGAGCTCCACCCTTCTCTACAGCAACAGAGTTCATCGCTTTCCTACACAGTCACCGCTAAGCTGAGAACACAGGTGAAGCAGATTCTGGCCTCCCACAATCCCAGGCAGCCCATCTTCCTCTACCTGGCGCTGCAGGCCCCATCCCGCTTCCTGCGCAGGCACTGCTCCCTGGGCCACCGCCCCCGCCGCCACTACGCCGCCATGCTGAGCTGCCTGGACAAGGCTGTGGGCCGAGTGGTGCGGGAGCTGAAGAGGAGGGGGCTGTACCGCCAATCAGTCATCATCTACTCCTCCGATAATGGGGGGCAGCCCGTGGCAGGGGGGTGCAACTGGCCTCTGCGAGGGGGGAAGGGCACTTACTGGGAAGGTGGGGTGAGGGCAGTGGGGTTCGTCCACAGCGTTCTCCTGAAAAGGATGAGGTCTTTCAGCAAGGCCCTGATCCACATCTCCGACTGGTACCCAACCCTGCTCTCCTTGGCAGGGGTCCCAGCCGCTGTGGTGTCCAGCTGGCACCTGGATGGGCACAACAGAGAAGGGGCGACCCCAGGATTCCCCGGAAGAGGGCTTTCGGATCTGGGATACATCCGTGCGATCCGGGCCGGGCCCTGGAAACTGATCACGGGGAACCCAGGGGACGGAGACTGGGTGCCCCCTCGGAGCCTGCCCGGGCCCCCGGTGGGCTGGGACACCCTGGAGAAGTGGACGGACATGCAGGGGAAGTCCGTCTGGCTCTTCAACATCAGCGCCGACCCCTATGAGAGATCCGACCTCTCCCTCTCGAGACCCGCGATGGTAAAGATGCTGTTGGCCCGTCTGGCAGAATATAACCAGACCGCTGTGCCGCTGCTGAACCCCTCCGAAGACCCCCGGGCGGACCCCCAGCTCCATGGGTGCGTCTGGTCCCCCTGGCTGGAGGATCAGTGGCCAAGAGTTGAGAGGGATGCTGAAGGAAGGCAAAGGGGACAAGAGGAGGCGCAGAATAAAACACTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003165 True 1584 mRNA 0.63 5 13396383 13405197

Neighbor

gene id symbol gene type direction distance location
AMCG00003161 LOC108273829,LOC107561852 coding downstream 54618 13288224 ~ 13341765 (-)
AMCG00003159 NA coding downstream 290986 13047336 ~ 13105397 (-)
AMCG00003153 NA coding downstream 383413 13012461 ~ 13012970 (-)
AMCG00003152 NA coding downstream 409611 12986350 ~ 12986772 (-)
AMCG00003148 NA coding downstream 425149 12919809 ~ 12971234 (-)
AMCG00003173 NA coding upstream 391878 13797075 ~ 13811136 (-)
AMCG00003174 gdh01,gdh3.2,glud1 coding upstream 443313 13848510 ~ 13871340 (-)
AMCG00003177 LOC106589263,LOC106579284 coding upstream 537117 13942314 ~ 13951931 (-)
AMCG00003180 NA coding upstream 559684 13964881 ~ 13994367 (-)
AMCG00003181 NA coding upstream 649704 14054901 ~ 14061129 (-)
G140971 NA non-coding downstream 565457 12821902 ~ 12830926 (-)
G140906 NA non-coding downstream 790431 12605752 ~ 12605952 (-)
G140904 NA non-coding downstream 793352 12602822 ~ 12603031 (-)
G140883 NA non-coding downstream 1034179 12357446 ~ 12362204 (-)
G140763 LOC106513751,LOC103376442,LOC107375490 non-coding downstream 1599369 11795976 ~ 11797014 (-)
G141175 NA non-coding upstream 155322 13560519 ~ 13560839 (-)
G141201 NA non-coding upstream 360759 13765956 ~ 13836294 (-)
G141219 LOC108273954,LOC108438198,LOC107550059,LOC107601819,LOC106904390 non-coding upstream 418217 13823414 ~ 13834549 (-)
G141221 NA non-coding upstream 437982 13843179 ~ 13843471 (-)
G141225 NA non-coding upstream 440753 13845950 ~ 13846159 (-)
G141004 NA other downstream 516962 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 541042 12851021 ~ 12855341 (-)
AMCG00003138 NA other downstream 656576 12728238 ~ 12739807 (-)
G140757 NA other downstream 1662621 11694006 ~ 11733762 (-)
G140758 NA other downstream 1748764 11640816 ~ 11647619 (-)
AMCG00003164 sec24c other upstream 2075 13407272 ~ 13430324 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other upstream 1264218 14669415 ~ 14674420 (-)
AMCG00003231 NA other upstream 1651446 15056643 ~ 15140819 (-)
G141826 NA other upstream 3342864 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 6138440 19543637 ~ 19569615 (-)

Expression


Co-expression Network