AMCG00003181


Basic Information

Item Value
gene id AMCG00003181
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14054901 ~ 14061129 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003181
GCACTTTGGCGCCGGTTGAAAATGGCAAAATACTGACGTGAACAAATCCGGGTTGGCTGAGTAACGAGGAAGGCGGATGACAAGGGGGTGTCTAATCTTTATTTGTGTTGTGAAAGCATCTGGGGTCTGTTGTGTGTTGCTTGACGGAGAAAAtctactttttagtttttgttttagcaAAACGCAAACCGAACAGCTCGTCCCTCCGGGTTGCAATCTCTTTCGTTGCACTTGTGTGGGTTACCGGTGCCGGATGGGCGGACAGCTGTCTGTGGACCCCAGCGTCCACGTGGTGATCGTGGGCGGGGGCTTCGGGGGCATCGCAGCGGCCAAGCAGCTCCGGGACAAGGGCGTCCCCTTCACCCTGCTGGACATGCGCGACGCCTTCCATCATAACGTGGGCTCTCTGAGGGCCTCCGTGCAGACCGGCTTTGCCCGGCGGACGTTCATCCCTTACTCTGAGACCTTCGGTGACAGCTTCAGACAGGGCCGCGTGGTGCGGGTGGACCTGGAGGCGCAGGTGGTGGTGCTGGAGGGAGGGGAGGAGCTGCTGCCCTGTGTGCGTCAGCAGGCCAAGGAggtcctgctggagaaaggcgTGGAGCTGCTGCTAGGTGAGAAGGTTCACAATCTGTCCGACCTCTCGCTCAATGTGAACCAGAAAGATATGAAGCTCTTGACGGACAAGGGCACCGAATTGGTGGCTGACCTCCTCATCCCCTGCATGGGGAACAAAGTGAACTCTGCGGCCTACCGTTCGGCGCTTGGCAGCGTCACGATGTTGCTGGCAATGGGCCGGGATGACGGCGTTGGGCAGTTCAATGGCTTCCGCCTTGCCAGGTTTCTCGTGGCTCAGGGCAAAAGCAAAGACCTGCTGGTGTGGAAGAGCTGGAAGGAGATGGGACAGATAGACCCCAAATGAGCTGGGAGCACCTGGAACACAGCAGTGGGCAAACTGGTTCCACTTTGCAACTAACTTTTTACATGTCTTTATGCataatatactacactatagattatacatatgtatactaGACATatcactatacactcacctaaaggattattaggaacacctgttcaatttctcatt

Function

GO: NA

KEGG:

id description
K22745 AIFM2; apoptosis-inducing factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003181 True 1093 mRNA 0.55 6 14054901 14061129

Neighbor

gene id symbol gene type direction distance location
AMCG00003180 NA coding downstream 60534 13964881 ~ 13994367 (-)
AMCG00003177 LOC106589263,LOC106579284 coding downstream 102970 13942314 ~ 13951931 (-)
AMCG00003174 gdh01,gdh3.2,glud1 coding downstream 183561 13848510 ~ 13871340 (-)
AMCG00003173 NA coding downstream 243765 13797075 ~ 13811136 (-)
AMCG00003165 NA coding downstream 649704 13396383 ~ 13405197 (-)
AMCG00003187 LOC106577245,LOC105010620,LOC103366016,LOC107678534,LOC104937335 coding upstream 35661 14096790 ~ 14108291 (-)
AMCG00003188 NA coding upstream 71891 14133020 ~ 14143426 (-)
AMCG00003189 NA coding upstream 119562 14180691 ~ 14188227 (-)
AMCG00003190 LOC105908129 coding upstream 199738 14260867 ~ 14270168 (-)
AMCG00003193 NA coding upstream 222276 14283405 ~ 14286345 (-)
G141261 NA non-coding downstream 82935 13971767 ~ 13971966 (-)
G141260 NA non-coding downstream 117192 13935284 ~ 13937709 (-)
G141225 NA non-coding downstream 208742 13845950 ~ 13846159 (-)
G141221 NA non-coding downstream 211430 13843179 ~ 13843471 (-)
G141201 NA non-coding downstream 218607 13765956 ~ 13836294 (-)
G141304 NA non-coding upstream 2043 14063172 ~ 14063526 (-)
G141305 NA non-coding upstream 2671 14063800 ~ 14064171 (-)
G141319 NA non-coding upstream 63755 14124884 ~ 14131066 (-)
G141372 NA non-coding upstream 312838 14373967 ~ 14374169 (-)
G141374 NA non-coding upstream 316520 14377649 ~ 14378313 (-)
AMCG00003164 sec24c other downstream 624577 13407272 ~ 13430324 (-)
G141004 NA other downstream 1175480 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 1199560 12851021 ~ 12855341 (-)
AMCG00003138 NA other downstream 1315094 12728238 ~ 12739807 (-)
G140757 NA other downstream 2321139 11694006 ~ 11733762 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other upstream 608286 14669415 ~ 14674420 (-)
AMCG00003231 NA other upstream 995514 15056643 ~ 15140819 (-)
G141826 NA other upstream 2686932 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 5482508 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 5740950 19802079 ~ 19876762 (-)

Expression


Co-expression Network