AMCG00003186 (zgc:154058,LOC106579282)


Basic Information

Item Value
gene id AMCG00003186
gene name zgc:154058,LOC106579282
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14069719 ~ 14080330 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003186
GTCTACAACCAGTCATGTGAGGAAGAGCTGTCCCAGCAGAGAGGCACTGTGTTGTGCTGCACGCTGGAGAATGTGCCCCTGATCAGTAAGTGTGGCACCCTGCCCCCAGAGAGCTGTTTCTTCAGTCTGATCTGCAGCACAGGCTCATTCATGGtgaTGGTCATCGGGCTGCTGCGCTATGCCCACGTCATTGAGAAACACCAGAACTGTGTGCTGAACACTGCTGGGCTCTCCACGTGCTGGATCTGCGCGGCCGGCCTCATCATGGTGGGAAACTTC

Function

symbol description
zgc:154058 Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 150A-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003186 True 279 mRNA 0.57 3 14069719 14080330

Neighbor

gene id symbol gene type direction distance location
AMCG00003179 NA coding upstream 20840 14038512 ~ 14048879 (+)
AMCG00003178 NA coding upstream 41463 14020345 ~ 14028256 (+)
AMCG00003176 NA coding upstream 131996 13915105 ~ 13937723 (+)
AMCG00003175 NA coding upstream 173897 13889930 ~ 13895822 (+)
AMCG00003172 LOC106904390,LOC104951044,LOC103481534,LOC107092473,LOC108248219 coding upstream 234678 13823890 ~ 13835041 (+)
AMCG00003185 NA coding downstream 11578 14091908 ~ 14093014 (+)
AMCG00003184 NA coding downstream 34361 14114691 ~ 14119370 (+)
AMCG00003183 NA coding downstream 76171 14156501 ~ 14177456 (+)
AMCG00003191 NA coding downstream 190069 14270399 ~ 14273054 (+)
AMCG00003199 NA coding downstream 312259 14392589 ~ 14396904 (+)
G141282 NA non-coding upstream 16037 14053469 ~ 14053682 (+)
G141249 NA non-coding upstream 84293 13981375 ~ 13985426 (+)
G141248 NA non-coding upstream 88620 13980837 ~ 13981099 (+)
G141245 NA non-coding upstream 119591 13949922 ~ 13950128 (+)
G141238 NA non-coding upstream 162633 13901775 ~ 13907086 (+)
G141401 NA non-coding downstream 363527 14443857 ~ 14445355 (+)
G141405 NA non-coding downstream 381837 14462167 ~ 14516510 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding downstream 420641 14500971 ~ 14508839 (+)
G141573 NA non-coding downstream 1105741 15186071 ~ 15186325 (+)
G141574 NA non-coding downstream 1109653 15189983 ~ 15190345 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 326176 13724910 ~ 13743543 (+)
AMCG00003158 NA other upstream 959085 13106456 ~ 13110634 (+)
AMCG00003141 LOC105923605 other upstream 1186721 12878685 ~ 12882998 (+)
G140939 NA other upstream 1329952 12730731 ~ 12739767 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other upstream 1391560 12371999 ~ 12678159 (+)
AMCG00003182 NA other downstream 42453 14122783 ~ 14131275 (+)
G141331 NA other downstream 100450 14180780 ~ 14184643 (+)
AMCG00003195 NA other downstream 203520 14283850 ~ 14299993 (+)
AMCG00003207 NA other downstream 520987 14601317 ~ 14605548 (+)
AMCG00003257 ablim1 other downstream 2383964 16464294 ~ 16500994 (+)

Expression


Co-expression Network