AMCG00003194


Basic Information

Item Value
gene id AMCG00003194
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14290195 ~ 14305579 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003194
ATGCAAATAGGGCTGCTAGGAGCACACTGGTTCAACAGCAGCACGCTGAATTACAGCACCTTActgctggaggaagaggagggcaTCCTGTACGTGGGAGCCCGGGGGGCAGTGTTTGCCctcaacagcagcagcattgACGGGGGAGACCACGTGGCTGATACTGAGCAGTTTCAGATCATGTCTGCGTTTGAGGAAGGGCGAGACAAGTGCCCCCGTGACCCGGCCAAGGGCTACACTGGACTCATCGTAGACGGAGAGATGTACACGGCCTCTCAGTACGAGTTCCGCAGCCTTTCCGACATTCGCCGCAATGTCCCCTTCCATACCCTGAAGACCGAGGAGGCCCCGAAGCGCTGGCTGGACGAGGCCGATTTCGTGGGGTCGGCGCTGGTGAGGGAGAGTGTGAACAGCTCGATCGGGGACGACGACAAGATCTACTTCTTCTTCACGGAGAAGAGCGACGAGCAGACCACCTACTACAACCAGGCCAAGGTGGCAAGGGTGGCACGGGTGTGCAAGGGGGACGGGGGCGGCCGGCGGACCCTGCAGAAGAAGTGGACATCCTTCCTGAAAGCACGTCTCGTCTGCTCCATCCCCGACTATGACTTCCACTTCAACATCCTGCGCAGCGTGTTTGTGCTGGAGAGCCAGGGCTGGCGGAGCAGCATCTTCTACGGGGTCTTTGGCTCCCAGTGGAAAAACGTCAAGGCTTCTGCTATCTGCCGGTACTCCATTGAGGACGTGGAGAAGGTCTTTGACGGGCCATACATGGAGAGCGAGGACTCCACTACCAAATGGACCAAATACACCGGCAAGGTTCCAGAACCTCGGCCCGGCTCGGTGAGTCAGAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003194 True 858 mRNA 0.59 7 14290195 14305579

Neighbor

gene id symbol gene type direction distance location
AMCG00003193 NA coding downstream 3850 14283405 ~ 14286345 (-)
AMCG00003190 LOC105908129 coding downstream 20027 14260867 ~ 14270168 (-)
AMCG00003189 NA coding downstream 101968 14180691 ~ 14188227 (-)
AMCG00003188 NA coding downstream 146769 14133020 ~ 14143426 (-)
AMCG00003187 LOC106577245,LOC105010620,LOC103366016,LOC107678534,LOC104937335 coding downstream 181904 14096790 ~ 14108291 (-)
AMCG00003192 NA coding upstream 36191 14341770 ~ 14367223 (-)
AMCG00003196 NA coding upstream 79516 14385095 ~ 14385715 (-)
AMCG00003201 actr1,LOC103036907,LOC105889177,LOC106585571,LOC108425179,LOC107602067,LOC106579867 coding upstream 99882 14405461 ~ 14411926 (-)
AMCG00003200 arl3,LOC102201386,LOC102778022,LOC108263849,LOC106589841 coding upstream 166765 14472344 ~ 14479936 (-)
AMCG00003205 NA coding upstream 185205 14490784 ~ 14496042 (-)
G141319 NA non-coding downstream 159129 14124884 ~ 14131066 (-)
G141305 NA non-coding downstream 226024 14063800 ~ 14064171 (-)
G141304 NA non-coding downstream 226669 14063172 ~ 14063526 (-)
G141261 NA non-coding downstream 318229 13971767 ~ 13971966 (-)
G141260 NA non-coding downstream 352486 13935284 ~ 13937709 (-)
G141372 NA non-coding upstream 68388 14373967 ~ 14374169 (-)
G141374 NA non-coding upstream 72070 14377649 ~ 14378313 (-)
G141402 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107722222,LOC107690907 non-coding upstream 138252 14443831 ~ 14446505 (-)
G141517 NA non-coding upstream 324833 14630412 ~ 14669084 (-)
G141520 NA non-coding upstream 353840 14659419 ~ 14659991 (-)
AMCG00003164 sec24c other downstream 859871 13407272 ~ 13430324 (-)
G141004 NA other downstream 1410774 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 1434854 12851021 ~ 12855341 (-)
AMCG00003138 NA other downstream 1550388 12728238 ~ 12739807 (-)
G140757 NA other downstream 2556433 11694006 ~ 11733762 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other upstream 363836 14669415 ~ 14674420 (-)
AMCG00003231 NA other upstream 751064 15056643 ~ 15140819 (-)
G141826 NA other upstream 2442482 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 5238058 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 5496500 19802079 ~ 19876762 (-)

Expression


Co-expression Network