AMCG00003196


Basic Information

Item Value
gene id AMCG00003196
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14385095 ~ 14385715 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003196
ATGCACCATTCCTACCTCCCTGCGTATCACACCTTCAACGGCATGTTTGCCACAGTTAACGCTCACAGACAGTGGCCGCCCATCCAGGCAGCGGGTTCGAACACCAACGGCCACTTCCTGCCACCCATCTACCCTCAGAGACCTGTGACCCTGGTCTGGGAGGCCCCACAGCTGGGAGCACCAGTGGAGTACCACCATTTTTATGGAATAAACCCCCTAAGCTTGCTTAACCCCTACTGGTACTGGCCATATGCTCGCCCCCCCCACAACAACTGGGGTTACGGGGCCAGGCGCTCGGAGCAGCAGAGCAGCGGCGCCTGGCCTGAGGGCTTCACCATGAAAGGGGAACTGCGTTGGGGCAAACTGGAGAGGGTGTACGGGCAACGCAAGGAGCTGCCCGAGTTTGTCAAGGAGGACTTGCGCCGGGTGTATGGCACCTACCCCCGGACTGATGTGAGCGTCACCTATCAGGGCGGGGAGTATGTGGTGCGCGGAGACCCCCGGGTGGGTGACCAGGAGTACAAGGTGGAGAAGAAGGTGGTGCGACAGGTGGAGTCTCCCGAGGGCGACAGCGTGAGCGAGATtgtggagaagaagaagaagaaaaagaaatccaAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003196 True 621 mRNA 0.59 1 14385095 14385715

Neighbor

gene id symbol gene type direction distance location
AMCG00003192 NA coding downstream 17872 14341770 ~ 14367223 (-)
AMCG00003194 NA coding downstream 79516 14290195 ~ 14305579 (-)
AMCG00003193 NA coding downstream 98750 14283405 ~ 14286345 (-)
AMCG00003190 LOC105908129 coding downstream 114927 14260867 ~ 14270168 (-)
AMCG00003189 NA coding downstream 196868 14180691 ~ 14188227 (-)
AMCG00003201 actr1,LOC103036907,LOC105889177,LOC106585571,LOC108425179,LOC107602067,LOC106579867 coding upstream 19746 14405461 ~ 14411926 (-)
AMCG00003200 arl3,LOC102201386,LOC102778022,LOC108263849,LOC106589841 coding upstream 86629 14472344 ~ 14479936 (-)
AMCG00003205 NA coding upstream 105069 14490784 ~ 14496042 (-)
AMCG00003206 mgea5,LOC107666422,LOC107667060,LOC107585241 coding upstream 113578 14499293 ~ 14512805 (-)
AMCG00003204 pprc1,LOC107585240 coding upstream 130454 14516169 ~ 14531632 (-)
G141374 NA non-coding downstream 6782 14377649 ~ 14378313 (-)
G141372 NA non-coding downstream 10926 14373967 ~ 14374169 (-)
G141319 NA non-coding downstream 254029 14124884 ~ 14131066 (-)
G141305 NA non-coding downstream 320924 14063800 ~ 14064171 (-)
G141304 NA non-coding downstream 321569 14063172 ~ 14063526 (-)
G141402 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107722222,LOC107690907 non-coding upstream 58116 14443831 ~ 14446505 (-)
G141517 NA non-coding upstream 244697 14630412 ~ 14669084 (-)
G141520 NA non-coding upstream 273704 14659419 ~ 14659991 (-)
G141569 NA non-coding upstream 768301 15154016 ~ 15154370 (-)
G141571 NA non-coding upstream 778239 15163954 ~ 15172448 (-)
AMCG00003164 sec24c other downstream 954771 13407272 ~ 13430324 (-)
G141004 NA other downstream 1505674 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 1529754 12851021 ~ 12855341 (-)
AMCG00003138 NA other downstream 1645288 12728238 ~ 12739807 (-)
G140757 NA other downstream 2651333 11694006 ~ 11733762 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other upstream 283700 14669415 ~ 14674420 (-)
AMCG00003231 NA other upstream 670928 15056643 ~ 15140819 (-)
G141826 NA other upstream 2362346 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 5157922 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 5416364 19802079 ~ 19876762 (-)

Expression


Co-expression Network