AMCG00003199


Basic Information

Item Value
gene id AMCG00003199
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14392589 ~ 14396904 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003199
ATGGGGCTGCGAGTGCTGGCCTGGGGCCTGGGGGCCCCCTCCACAGCCCTGCTGTACGGCTCCCTGGCCCTCTTCATCTCCATCCTGCATAACGTCTTCCTTCTCTACTATGTTGAGACCTTCGTGTCCATCTACAAGATTGACAAAGTCTCCTTTTGGGTGGGGGAGACTGTGTTCCTGATCTGGAACAGCCTCAATGACCCTCTCTTCGGCTGGCTGAGTGACCGCTCCTTCCTTGGCTCCCCACGGTCGGGCGACCCGATCTCGCTGCCTGTGGTGGTGTTGAAGAGGCTGCGGGCCCTGTCTGTGAGCGGGCCCCTCCTGGCGCTCTCCTTCCTGGCGTTCTGGGTGGCGTGGGCGCCCCCGGGCCTGCAGTTcgtggtgtgtctgtgtctgtatgacGGCTTCCTCACCGCCGTCGACCTCAACCACAACGCGTTGCTGGCCGACCTGGCCGTGTCGGCGGGGGACCGCACCCAGCTCAACTTCTACTGCTCCCTGTTCAGTGCCCTGGGCTCCCTGTCCGTCTTCATGTCCTACTCCTTCTGGGACAAGGAGGACATGGCCTCGTTCCGGCTGTTCTGCGTGGTGCTGTCTGGGGTGGCGGCGCTGGGCTTCAGCCTGGTCTCCCGCCTGCTGCAGCAGCGCTTCCAGAAACAGGCCCGGCTGCAGGATGAGGCCGCCGCGCTCAAGGAGCTGTGTGTGGGACAGACCCCGCTGGCTCAGGACAAGACCGTCACACTGGGGGAATATCTGAAGCAGCTCTCTAAACACAGGAACTTCATGTGGTTCGTCACCATGAACCTCGTTCAGGTATTTCACTGCCACTTCAACAGCAACTTCTTCCCTCTGTTTCTGGAGCACCTGCTGTCAGACCGGATCACGGCCGCCACTGGCTCCTTCCTCCTGGGAATCTCCTACATCGCCCCCCACCTCAACAACCTCTACTTCCTCACGCTGTGTCGGCGCTGCGGCGTCTATCGGGTCATCCGCTGGCTGTTCCTGCTCAAGCTGGGCCTCGGGGTGCTCATGTTGCTGGCCGGGCCGGACCAGATCTACCTGCTGTGCATCTTCATCGCCAGCAACCGCGTGTTCACGGAGGGCACCTGCAAGCTGCTCAACCTGGTGATCACAGACCTGGTGGATGAAGACTTTGTGCTGCACCGGCGGCAGCAGGCGGCGTCGGCGCTGCTCTTCGGCATGGTGGCGCTGGTGACCAAGCCGGGCCAGACCTTCGCCCCGCTCATTGGCACCTGGCTGCTGTGCGTCTACACTGGTTACGATATCTTCCAGAAGGACGCCCTACAGGACGTGGTgccccccccagccctcccCTACCCCGCGCTTGCCTCCACCCTGCGCCAGGGCTGCTTCTACCTACTGGTGCTGGTGCCCATCACCTGTgccctgctgcagctgctggccTGGTCCCAGTTCACCCTGCATGGCAAGCGGCTGCACAGCATCAAGAGCCTGCGCCAGGGCAGCCAGCCCCACTGGCCCCAGGACGTCAAGGCCATCTGA

Function

GO:

id name namespace
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0050780 dopamine receptor binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0031752 D5 dopamine receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003199 True 1524 mRNA 0.63 8 14392589 14396904

Neighbor

gene id symbol gene type direction distance location
AMCG00003191 NA coding upstream 119535 14270399 ~ 14273054 (+)
AMCG00003183 NA coding upstream 215133 14156501 ~ 14177456 (+)
AMCG00003184 NA coding upstream 273219 14114691 ~ 14119370 (+)
AMCG00003185 NA coding upstream 299575 14091908 ~ 14093014 (+)
AMCG00003186 zgc:154058,LOC106579282 coding upstream 312259 14069719 ~ 14080330 (+)
AMCG00003197 sufu,LOC107666454 coding downstream 15847 14412751 ~ 14437585 (+)
AMCG00003202 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107690907,LOC107722222 coding downstream 49029 14445933 ~ 14455523 (+)
AMCG00003198 LOC107569416 coding downstream 59837 14456741 ~ 14459478 (+)
AMCG00003203 sfxn2,LOC107755483 coding downstream 85165 14482069 ~ 14491605 (+)
AMCG00003211 LOC108444470,LOC107567630,LOC106591328,LOC107700700,LOC108270891,LOC107702035 coding downstream 159990 14556894 ~ 14563419 (+)
G141282 NA non-coding upstream 338907 14053469 ~ 14053682 (+)
G141249 NA non-coding upstream 407163 13981375 ~ 13985426 (+)
G141248 NA non-coding upstream 411490 13980837 ~ 13981099 (+)
G141245 NA non-coding upstream 442461 13949922 ~ 13950128 (+)
G141238 NA non-coding upstream 485503 13901775 ~ 13907086 (+)
G141401 NA non-coding downstream 46953 14443857 ~ 14445355 (+)
G141405 NA non-coding downstream 65263 14462167 ~ 14516510 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding downstream 104067 14500971 ~ 14508839 (+)
G141573 NA non-coding downstream 789167 15186071 ~ 15186325 (+)
G141574 NA non-coding downstream 793079 15189983 ~ 15190345 (+)
AMCG00003195 NA other upstream 92596 14283850 ~ 14299993 (+)
G141331 NA other upstream 207946 14180780 ~ 14184643 (+)
AMCG00003182 NA other upstream 261314 14122783 ~ 14131275 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 649046 13724910 ~ 13743543 (+)
AMCG00003158 NA other upstream 1281955 13106456 ~ 13110634 (+)
AMCG00003207 NA other downstream 204413 14601317 ~ 14605548 (+)
AMCG00003257 ablim1 other downstream 2067390 16464294 ~ 16500994 (+)
AMCG00003256 NA other downstream 2130285 16527189 ~ 16559206 (+)
G141962 NA other downstream 3279375 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 3324340 17721244 ~ 17725381 (+)

Expression


Co-expression Network