AMCG00003208


Basic Information

Item Value
gene id AMCG00003208
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14595659 ~ 14598653 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003208
ATGCAAGTATCCCTGTGTGTGGCAACACTCTCACTGCTGGCTCTGACACTAGACACCTCTACTGCTAAACCGTCTGCACTGAAATCCAAACCCCATGGTACCAATGAGGGCCAGTGTGGTTGTAGATGTTTACTGAGGCGGCCATCCTTGgagcagtgcatgctgggtaCTGAGCAGGGCGAATGGAAACACAACCCCTCTCTGATACAGCCGCTGCCCTCTTGGGGTTCAAAGTGCAAGTGTCACTGTGAGATCACAGGCTACAGCCCCTGTGAGAATGAACTGAAGTTGGACAGGCTGCGAAACAAAATCCCAGACATCACCAAGATTCAATCCACAGTGAAGATTCTTCAGCAGGCTCTGGAAAACTCAGATATCCGGCGACTTAGTTCCAACACTAACAGAGTGATCACCCATATCAAGACACTGGATCAGGTTCTCCAGACCAACGAGGTAGTGGACAAGTCGCTGTTGAAGAAGCTGCAAGGCTCTCTCCTTCACAATGCACTGCTCTACCAGAATTTCAGCGAGGCAATTAGGTCCCTGTCTCGCGAGGTCTACAAACTCAATGGCCATCTGAGGCACACTGTTGCAACACAGCCGAGTAAAGATATCACTGACCACACTGGGGACGTGCACAACAATGTAATTAGTCACCAGAACTCTTTACCTCTGGTAGACAACAATACCAATCCAAGCACAGAGACTCATCACAGCCAAATCGTCAATGCTACCATGACACATCCTAACCAACTCACCAATGTGAGTCAGGAGTCCCACAGTATGCATCATGGCAACCAGAAGGTGAGAGAAGTCTCAAAAGGAAAACACTTGATACAACAAAGACAATCCAAAAACATCGAAATCAATCACAAACAGTCTCTGAACACTGTGCATAAGAATAACTGCTCAGGAACGTTGATTTCAGTGGAGTTCCCCCAGATTGTGGCTCATTTTGGGAGCAAGGAAGGAGCTTGGTTTAGTGACCCTATATTCCCAGATGGGACCATCTATGTGGCAGATAGGATTTTTGGCAGCATCCTCTTGGAGTTCAAGGACCTCAAAGCTCTGAGACAAGACAATCCCTCCTCCCCACATCATTCGTTACCATGCAGCTACTCGGGTACAGGACACACTGTCTACAATGGCTCCTTCTACTACCTCAAGGCATTCACTCAAACCCTGATCCGCTACAGCCTGGCCCAGCGAGCTCTGGCTGCTTGGACTCAACTGCATGACCTCTCCATCCCCACAAGGTCGGGGTCCGGTGTGGACTGGCAGGGTCATAATGATGTCACTCTGGGTGCAGATGAAGCTGGACTCTGGGCAGCCTACCCTTCCACCCACTTTGGAGCTATTTTGGAGGACGAACTGGTTATGATCCGATTAGACCCTGTGGAGTTGCTTCCCCTCAAGGACTCGTATTGGAAGACAGGTCTCCAGAGATCCCAGTATGGGCTCTACTTTCTCAGCTGTGGTGTTCTGTACTGTCTGTATCAGGATGCACTGCACTATGCCtttgacacgcacacacaggctCAGAGCCGTATTTCCCTGTCCTTCCCTGCTAGAAGTGATTCCACACACCTCACCCAGCTTTATTATTGTCCCTGGCGCAGGGCATTGTTTGGCTGGGATAATGCCACACAAATCTCCTACTCACTCCTTTTCACACAGtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003208 True 1680 mRNA 0.50 6 14595659 14598653

Neighbor

gene id symbol gene type direction distance location
AMCG00003210 NA coding upstream 3094 14571728 ~ 14592565 (+)
AMCG00003211 LOC108444470,LOC107567630,LOC106591328,LOC107700700,LOC108270891,LOC107702035 coding upstream 32240 14556894 ~ 14563419 (+)
AMCG00003203 sfxn2,LOC107755483 coding upstream 104054 14482069 ~ 14491605 (+)
AMCG00003198 LOC107569416 coding upstream 136181 14456741 ~ 14459478 (+)
AMCG00003202 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107690907,LOC107722222 coding upstream 140136 14445933 ~ 14455523 (+)
AMCG00003212 NA coding downstream 44956 14643609 ~ 14644327 (+)
AMCG00003209 NA coding downstream 58744 14657397 ~ 14665563 (+)
AMCG00003218 NA coding downstream 138701 14737354 ~ 14765347 (+)
AMCG00003217 NA coding downstream 189472 14788125 ~ 14800222 (+)
AMCG00003216 csgalnact2,LOC106604550,LOC102795995 coding downstream 209965 14808618 ~ 14826815 (+)
G141405 NA non-coding upstream 79149 14462167 ~ 14516510 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding upstream 86820 14500971 ~ 14508839 (+)
G141401 NA non-coding upstream 150304 14443857 ~ 14445355 (+)
G141282 NA non-coding upstream 541977 14053469 ~ 14053682 (+)
G141249 NA non-coding upstream 610233 13981375 ~ 13985426 (+)
G141573 NA non-coding downstream 587418 15186071 ~ 15186325 (+)
G141574 NA non-coding downstream 591330 15189983 ~ 15190345 (+)
G141582 NA non-coding downstream 618589 15217242 ~ 15217551 (+)
G141592 NA non-coding downstream 654187 15252840 ~ 15254844 (+)
G141829 NA non-coding downstream 2200306 16798959 ~ 16801312 (+)
AMCG00003195 NA other upstream 295666 14283850 ~ 14299993 (+)
G141331 NA other upstream 411016 14180780 ~ 14184643 (+)
AMCG00003182 NA other upstream 464384 14122783 ~ 14131275 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 852116 13724910 ~ 13743543 (+)
AMCG00003158 NA other upstream 1485025 13106456 ~ 13110634 (+)
AMCG00003207 NA other downstream 2664 14601317 ~ 14605548 (+)
AMCG00003257 ablim1 other downstream 1865641 16464294 ~ 16500994 (+)
AMCG00003256 NA other downstream 1928536 16527189 ~ 16559206 (+)
G141962 NA other downstream 3077626 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 3122591 17721244 ~ 17725381 (+)

Expression


Co-expression Network