AMCG00003212


Basic Information

Item Value
gene id AMCG00003212
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14643609 ~ 14644327 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003212
GTCATCAAACTGCTGGACTCTTTTGAGCTGCCTGACGAATACCTGCTGGTCCTGGAGCGGCCTGAGCCATGCCAGGACCTTTACAGCTATGCTGGGGACAAAGGAGACCACCTGGAGGAGACTGAGGCCAAGAGGTTCATGAAGCAGCTGGTGCAGACCCTACAGCACTGCCGCACAACTGACTTCACTCCTCCTGAGTGGATACTGCATTCTGGCTACAGAGGAGTCCCAGCCACCGTCTGGACTTTGGGAGTTCTGCTCTTTGGCATCACCTGTGGGCATCTCCCATTTCAAAACGAAGAGGAGATCGTACATGGTGTGCTGGACTTCCCAGCAGATGTCTCCATGGATTGCCAGGACCTGATTCGTGGCTGCCTGGTCCACCAACCAGAGGACCACCCAACCTTGGAGCAGATTCTGCTCCATCCCTGGATGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003212 True 438 mRNA 0.55 3 14643609 14644327

Neighbor

gene id symbol gene type direction distance location
AMCG00003208 NA coding upstream 44956 14595659 ~ 14598653 (+)
AMCG00003210 NA coding upstream 51044 14571728 ~ 14592565 (+)
AMCG00003211 LOC108444470,LOC107567630,LOC106591328,LOC107700700,LOC108270891,LOC107702035 coding upstream 80190 14556894 ~ 14563419 (+)
AMCG00003203 sfxn2,LOC107755483 coding upstream 152004 14482069 ~ 14491605 (+)
AMCG00003198 LOC107569416 coding upstream 184131 14456741 ~ 14459478 (+)
AMCG00003209 NA coding downstream 13070 14657397 ~ 14665563 (+)
AMCG00003218 NA coding downstream 93027 14737354 ~ 14765347 (+)
AMCG00003217 NA coding downstream 143798 14788125 ~ 14800222 (+)
AMCG00003216 csgalnact2,LOC106604550,LOC102795995 coding downstream 164291 14808618 ~ 14826815 (+)
AMCG00003221 NA coding downstream 234421 14878748 ~ 14886460 (+)
G141405 NA non-coding upstream 127099 14462167 ~ 14516510 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding upstream 134770 14500971 ~ 14508839 (+)
G141401 NA non-coding upstream 198254 14443857 ~ 14445355 (+)
G141282 NA non-coding upstream 589927 14053469 ~ 14053682 (+)
G141249 NA non-coding upstream 658183 13981375 ~ 13985426 (+)
G141573 NA non-coding downstream 541744 15186071 ~ 15186325 (+)
G141574 NA non-coding downstream 545656 15189983 ~ 15190345 (+)
G141582 NA non-coding downstream 572915 15217242 ~ 15217551 (+)
G141592 NA non-coding downstream 608513 15252840 ~ 15254844 (+)
G141829 NA non-coding downstream 2154632 16798959 ~ 16801312 (+)
AMCG00003207 NA other upstream 38061 14601317 ~ 14605548 (+)
AMCG00003195 NA other upstream 343616 14283850 ~ 14299993 (+)
G141331 NA other upstream 458966 14180780 ~ 14184643 (+)
AMCG00003182 NA other upstream 512334 14122783 ~ 14131275 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 900066 13724910 ~ 13743543 (+)
AMCG00003257 ablim1 other downstream 1819967 16464294 ~ 16500994 (+)
AMCG00003256 NA other downstream 1882862 16527189 ~ 16559206 (+)
G141962 NA other downstream 3031952 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 3076917 17721244 ~ 17725381 (+)
G142078 NA other downstream 3944247 18588574 ~ 18692204 (+)

Expression


Co-expression Network