AMCG00003215


Basic Information

Item Value
gene id AMCG00003215
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14676707 ~ 14773565 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003215
ATGGTGTCTAGATCAGATCAAAGCACAAATTGCACTGGGGAACAACGCAGAGTGCCGGGATACGATGAGTATCGACTAGTAACGGGCTGCACCGAGGGCTCGTACAGTCCCTCTGTGCTCCGTTCCACTGCTAACAAATTTGGCAAAAGGGAGGAGATTCTGATGAAGATGGCTGGGACTGACACCGCATCCTCAGGAGTCATCAAACTGCTGGACTCTTTTGAGCTGCCTGACGAATACCTGCTCGTCCTGGAGCGGCCTGAGTTATGCCAGGACCTTTACAGCTATGCTGGGGACCAAGGAAACCACCTGCAGGAGACTGAGGCCAAGAGGTTCATGAAGCAGCTGGTGCAGACTCTACAGCACTGCCATGAGAAAGGAGTCCTGCACCGAGACATCAATACTATATCTTTGGGAGTTCTGCTCTTTCACATCAACTGTGGGGATCTTCCCTTCAAAACAGAAGAGGAGATCATACATGGTGTGCTGCACTTCCCAGCAGATGTCTCCACAGATTGCCAGAACCTGATACGTGGCTGCCTGGCCCACCAACCAGAGGACCGCCCATCCTTGGAGCAGATTCTGCTCCATCCCTGGATGTGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003215 True 606 mRNA 0.53 6 14676707 14773565

Neighbor

gene id symbol gene type direction distance location
AMCG00003213 NA coding downstream 44601 14631357 ~ 14632106 (-)
AMCG00003204 pprc1,LOC107585240 coding downstream 145075 14516169 ~ 14531632 (-)
AMCG00003206 mgea5,LOC107666422,LOC107667060,LOC107585241 coding downstream 163902 14499293 ~ 14512805 (-)
AMCG00003205 NA coding downstream 180665 14490784 ~ 14496042 (-)
AMCG00003200 arl3,LOC102201386,LOC102778022,LOC108263849,LOC106589841 coding downstream 196771 14472344 ~ 14479936 (-)
AMCG00003220 NA coding upstream 59114 14832679 ~ 14849623 (-)
AMCG00003219 NA coding upstream 82525 14856090 ~ 14878016 (-)
AMCG00003222 inpp5f coding upstream 114617 14888182 ~ 14915336 (-)
AMCG00003223 NA coding upstream 189754 14963319 ~ 14973599 (-)
AMCG00003227 NA coding upstream 236456 15010021 ~ 15030801 (-)
G141517 NA non-coding downstream 7623 14630412 ~ 14669084 (-)
G141520 NA non-coding downstream 16716 14659419 ~ 14659991 (-)
G141402 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107722222,LOC107690907 non-coding downstream 230202 14443831 ~ 14446505 (-)
G141374 NA non-coding downstream 298394 14377649 ~ 14378313 (-)
G141372 NA non-coding downstream 302538 14373967 ~ 14374169 (-)
G141569 NA non-coding upstream 380451 15154016 ~ 15154370 (-)
G141571 NA non-coding upstream 390389 15163954 ~ 15172448 (-)
G141583 NA non-coding upstream 443909 15217474 ~ 15217807 (-)
G141681 NA non-coding upstream 1215370 15988935 ~ 15992678 (-)
G141704 atrnl1b,atrnl1,LOC107755548,LOC107566689,LOC107702414 non-coding upstream 1234498 16008063 ~ 16061038 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 2287 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 1246383 13407272 ~ 13430324 (-)
G141004 NA other downstream 1797286 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 1821366 12851021 ~ 12855341 (-)
AMCG00003138 NA other downstream 1936900 12728238 ~ 12739807 (-)
AMCG00003231 NA other upstream 283078 15056643 ~ 15140819 (-)
G141826 NA other upstream 1974496 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 4770072 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 5028514 19802079 ~ 19876762 (-)

Expression


Co-expression Network