AMCG00003218


Basic Information

Item Value
gene id AMCG00003218
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14737354 ~ 14765347 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003218
attttctctcactctcatGGTTTTTGTCAACTATGGAGGAGGGGGCTACTGGTTTTTTGGACACGCTCCATGGAATGTGGCCCTGGCTTTCAGCTCAATGCTGAGGAGAGGGGTGAGCCGGACGCAGCTCCTACGTAAGCTGACCTGGAGGACAGTGGTCCTGTTCCTCATTGGAGTCTTCTTCATGAACTACGGCCCCAGGGATGGCCCATGGCCGTTGGTGGAATCCTGTCAAAGACATCGTCCTGTATTGGCCAGAGTGGCTCTTCATTATTCTACTGGAGATACTTTGGTTGTCCTTCACCTTTCTCATGCCAGTTCCAAACTGTCCAGCgAATTGTATCGAACTACAGTGCCCTTTGACCCCGAGGGGGTCCTAGGCACAGCCAATTCCATTGTAATGGGTTTCCTTGGAATGCAGGCCGGCAAGATTCTGCTTTTTTACCGGAAGAGAACTGGCAGCATTCTGAAACGGTTCCTGCTGTGGGCTCTGTTACTGGGAATCTTATCGGCCATCCTTTCTAAGTGCACACGAGACGAGGGATTTATACCTGTCAATAAAAACCTCTGgtctCTGTCTTACATCACCTGTATGGGATGGTCTTCTTTCATCCTGCTTGGGGCAATGTACTTCATAATTGATGTCAAAGGCTGGTGGGGAGGCCAACCTTTCATTTTCCCAGGGATGAACTCCATCTTTGTGTATGTCGGCCACTCCCTCCTGGGCACCTACTTTCCATTCAACTGGGATCTTCAGTTTCAGGAGAGCCATGCTGCACAGCTCTTCCAGGACCTACTAGGAACAGCCCTCTGGGTCCTCATCGCCTACTTCTTGTACAGACATAAGTTCTTTCTCAAAATC

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003218 True 862 mRNA 0.50 8 14737354 14765347

Neighbor

gene id symbol gene type direction distance location
AMCG00003209 NA coding upstream 71791 14657397 ~ 14665563 (+)
AMCG00003212 NA coding upstream 93027 14643609 ~ 14644327 (+)
AMCG00003208 NA coding upstream 138701 14595659 ~ 14598653 (+)
AMCG00003210 NA coding upstream 144789 14571728 ~ 14592565 (+)
AMCG00003211 LOC108444470,LOC107567630,LOC106591328,LOC107700700,LOC108270891,LOC107702035 coding upstream 173935 14556894 ~ 14563419 (+)
AMCG00003217 NA coding downstream 22778 14788125 ~ 14800222 (+)
AMCG00003216 csgalnact2,LOC106604550,LOC102795995 coding downstream 43271 14808618 ~ 14826815 (+)
AMCG00003221 NA coding downstream 113401 14878748 ~ 14886460 (+)
AMCG00003225 tial1,LOC106576826,LOC107559311 coding downstream 211352 14976699 ~ 14987925 (+)
AMCG00003226 NA coding downstream 228467 14993814 ~ 14999491 (+)
G141405 NA non-coding upstream 220844 14462167 ~ 14516510 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding upstream 228515 14500971 ~ 14508839 (+)
G141401 NA non-coding upstream 291999 14443857 ~ 14445355 (+)
G141282 NA non-coding upstream 683672 14053469 ~ 14053682 (+)
G141249 NA non-coding upstream 751928 13981375 ~ 13985426 (+)
G141573 NA non-coding downstream 420724 15186071 ~ 15186325 (+)
G141574 NA non-coding downstream 424636 15189983 ~ 15190345 (+)
G141582 NA non-coding downstream 451895 15217242 ~ 15217551 (+)
G141592 NA non-coding downstream 487493 15252840 ~ 15254844 (+)
G141829 NA non-coding downstream 2033612 16798959 ~ 16801312 (+)
AMCG00003207 NA other upstream 131806 14601317 ~ 14605548 (+)
AMCG00003195 NA other upstream 437361 14283850 ~ 14299993 (+)
G141331 NA other upstream 552711 14180780 ~ 14184643 (+)
AMCG00003182 NA other upstream 606079 14122783 ~ 14131275 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 993811 13724910 ~ 13743543 (+)
AMCG00003257 ablim1 other downstream 1698947 16464294 ~ 16500994 (+)
AMCG00003256 NA other downstream 1761842 16527189 ~ 16559206 (+)
G141962 NA other downstream 2910932 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 2955897 17721244 ~ 17725381 (+)
G142078 NA other downstream 3823227 18588574 ~ 18692204 (+)

Expression


Co-expression Network