Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003225 |
| gene name | tial1,LOC106576826,LOC107559311 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 14976699 ~ 14987925 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| tial1 | Predicted to enable DNA binding activity and RNA binding activity. Orthologous to human TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1). |
| description |
|---|
| nucleolysin TIAR |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| id | description |
|---|---|
| K13201 | TIA1, TIAL1; nucleolysin TIA-1/TIAR |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003225 | True | 1215 | mRNA | 0.47 | 11 | 14976699 | 14987925 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003221 | NA | coding | upstream | 90239 | 14878748 ~ 14886460 (+) |
| AMCG00003216 | csgalnact2,LOC106604550,LOC102795995 | coding | upstream | 149884 | 14808618 ~ 14826815 (+) |
| AMCG00003217 | NA | coding | upstream | 176477 | 14788125 ~ 14800222 (+) |
| AMCG00003218 | NA | coding | upstream | 211352 | 14737354 ~ 14765347 (+) |
| AMCG00003209 | NA | coding | upstream | 311136 | 14657397 ~ 14665563 (+) |
| AMCG00003226 | NA | coding | downstream | 5889 | 14993814 ~ 14999491 (+) |
| AMCG00003224 | NA | coding | downstream | 14885 | 15002810 ~ 15008216 (+) |
| AMCG00003228 | NA | coding | downstream | 48026 | 15035951 ~ 15039764 (+) |
| AMCG00003230 | NA | coding | downstream | 64417 | 15052342 ~ 15056226 (+) |
| AMCG00003229 | NA | coding | downstream | 147287 | 15135212 ~ 15146285 (+) |
| G141405 | NA | non-coding | upstream | 460189 | 14462167 ~ 14516510 (+) |
| G141412 | mgea5,LOC106961065,LOC107569412 | non-coding | upstream | 467860 | 14500971 ~ 14508839 (+) |
| G141401 | NA | non-coding | upstream | 531344 | 14443857 ~ 14445355 (+) |
| G141282 | NA | non-coding | upstream | 923017 | 14053469 ~ 14053682 (+) |
| G141249 | NA | non-coding | upstream | 991273 | 13981375 ~ 13985426 (+) |
| G141573 | NA | non-coding | downstream | 198146 | 15186071 ~ 15186325 (+) |
| G141574 | NA | non-coding | downstream | 202058 | 15189983 ~ 15190345 (+) |
| G141582 | NA | non-coding | downstream | 229317 | 15217242 ~ 15217551 (+) |
| G141592 | NA | non-coding | downstream | 264915 | 15252840 ~ 15254844 (+) |
| G141829 | NA | non-coding | downstream | 1811034 | 16798959 ~ 16801312 (+) |
| AMCG00003207 | NA | other | upstream | 371151 | 14601317 ~ 14605548 (+) |
| AMCG00003195 | NA | other | upstream | 676706 | 14283850 ~ 14299993 (+) |
| G141331 | NA | other | upstream | 792056 | 14180780 ~ 14184643 (+) |
| AMCG00003182 | NA | other | upstream | 845424 | 14122783 ~ 14131275 (+) |
| AMCG00003168 | LOC107706030,LOC107743565,LOC107666486 | other | upstream | 1233156 | 13724910 ~ 13743543 (+) |
| AMCG00003257 | ablim1 | other | downstream | 1476369 | 16464294 ~ 16500994 (+) |
| AMCG00003256 | NA | other | downstream | 1539264 | 16527189 ~ 16559206 (+) |
| G141962 | NA | other | downstream | 2688354 | 17676279 ~ 17678522 (+) |
| AMCG00003291 | bbip1 | other | downstream | 2733319 | 17721244 ~ 17725381 (+) |
| G142078 | NA | other | downstream | 3600649 | 18588574 ~ 18692204 (+) |
