AMCG00003234


Basic Information

Item Value
gene id AMCG00003234
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 15163724 ~ 15167974 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003234
ATGCAGGGGAAGTTAGGCCACAGACATGATGGAGATATCTCCCTCATGGAGGCCAGCCGGCGTCGACTATCGGACCACTCCCCTTCCGAGGGCCCATCCGGCTCAGACTGCGTGTGGGACGGGCTGGGGACGCCCTTCTTCCCGTTGTCCAAAAGCTCCTCGGACGTGGTGCAGGTCCCGCCATGCCAGGATGGGCCGATGAGGAACAAGCTTGACATGAAGAAGAGCCTGAGCAGCACCACGTGCCAGCAGCAGAGGGCGCCTGAGAGCAGCCACCACAGGAGCACCCAGAGCGGCTGGGAGATCTGCTATGGCGCAACTTCAGAGCGGGGGACAGGGGGCACTGCCACCCAGGCCCACAGCACTGCAGGGACCCCCAGCTACAGAGCAACAGCAGAAGAGACCCACTCGTTAACTGTGAACCATCACGGCATGGACAAACCTCCCAGGGTGACAGTGCAGGAGAACCACACGGCAACCCCCATTAGGGACTCTTGCAGGGACCGGCTGGATCTGATCCATCCACCGGTCCAGAGGAGCCACTCAGACAGCCTGCACATGTTCAGTCAGAGCCACTGTCCCGGGGAGTTGGTGGTGACACGCAGCGAGACCAGCTTTGCGTGCAGCGGGCTGGGGGTGTGCAGCAGAGAGGTCCCCGCCTGCCCGTCTTTGGTGTGCAAGCAGGCCATGCAGCTGCAGCAGAGCAATACGGTGACCATATGCCGGGGCAGCAACAATAGCAGCCCCACTCAGCAGACCGTGCAGATCTTCCTGCCTGCTACCACTCACGGCGGGGGGGACGTGGAGCCAAGGTATGCCACCTGCGGGGACATTTGCTTCGGCCAGCCTTCCAATCATGGAGGGCTGGAGGACACCTTTGCCGCCTACTGCCACCCACTGCCCATCCCCACCCCTGCCCAACTCCTCCCACGGATGGCCAGTTCAGCTAACGAGAGCTGCCAGCAGCGTCCACCCACCCAGACCTCGGTCCTCAGCTTCCCCAGGCTGGTGTCATCGGTCAGCGAGACGGGGCTGGACGCCAAACACATGATGCACTGCTGCAATGCGGACGGTGCCGACCAGGTGGTGGCTTTCACCCCTGGCCAGGCCCAGCATGGGGAGTGCAAGAAGACCAGGGACATGGGGACCATGACCTCGGCCACTCCGCTGATAGACGTGGGCGTTCAGACAGGCACCGCGGAGATGCCTCCCCCACACGTCTTCCCCGAGGTCAGCCTGCgggaggaagggggggtggCAGCAGCTTCGGGGCAGAAGTCGCCCGTGAAGGAGGTGATGTGGGACGCGGAGGGGATGACATGGGAGGTGTACGGGGCATCGGTGGACCCCGAAGTGCTGGGGCTGGCCATCCAGAAACACCTGGAGCTGCAGATCAAGGAGACAGCCAGGCGATCTTCCAAACTGTCCCGCCAGGACACCATCAGCTCCCAGCAGGGTGACCGGCAACGGAAGAGAAGCGGAGTCATAAGCTCTCTGAAAAGCCCGGCTTGCTGTGCCCGCTCCAGCAGCGCGGTAGACTGACACCTGCAGGCACAGACCCACAGGGTAATGCTTAACAGCCTGTTCCCGATTCAATGCCAAACAACACGGCTTATAACTGTATACAATAGGAAATGGCACAATGTAGTCCGATGCGCCCTGCTATATGAAACACAGATGATGTATAAACACTGAGCCCAAAACAGCAGACGCAAACACAGCTCTATCTGATAGCCTGGTCTTGTGCAACATGCAGGACCTGATGTAAACACTCATTTATAACCATACGAGAGTACTGGAcaattctgtgtgtttttttccccttgctcGTGTTTCAATAGCAACACTTGCTCTGTAAAATGCCACCCCTGACAATACGGAACAAAACAAGAGTACTCCACAGAGTACTTCTATTCAATTACTtgcaaaacaatcaatacaattaaattaaaagcagcaccatagtaaatataatgtaatgtctaTTGATTCAGCATAATATGGCGCTGTGGGatacaatcaaataaagtgcaaactaatgcaatttaattaaacctAATACTACAAGTACGCAGTTTTACACATTCCTAGGTACAGTAGTTGTTCGCTAGGTGGTTCTGATACAGGGAATAATATGGTTAACATTAAGCAAGGTTCAGATGCCAAACAAGTGActggttttgtatttcttagaCAATGGAAaactattaatttataaaaccaaaacactTGCAAATTCAAACAACTGTACTCACTTCATTGATAAATAGAAATGGGTCAATTATAGTGGCCCAGACCAGTCTCAAACCCAGTTCTTGCTGGGCAGCGGTGTCTTCTAATTTGTGTTCCAGCTGGAGCTCTCAAACACATAATCAGCATAGTCATTTGATCAATTAGACACGCAGAACGTTATTGGAAGGTCTTTCACAGTTCATCGCTTCAAAGACTCTTCTGATTGAAAGGACACTACATGGAACATTAATTGCAGCCTGTGGAGAAGTCTATCGAATCGGTTAACCAGCCTAGTGAAGTTACtgggagctgggctggaacgGAAGCAAGAAGACACCATTGCCCTGGTTTGGGACACTTGACCTCTACAACTGGACCTGGGGTGGAGACCACAGCTAGAGGTTTGGTTTCCCCAGTTTGGGTGATGTTTGCGTTGTCTTGTCATCCAGGCTCTGCTCCTTTGCCACGTGGCTGGTCTGCAGTGTCCTGGGAGCCTGGCAGGGTGGGCACCTGGAATAGTGCCCAGCCTGACCACAGCAGGGGGAGAGAGCCAGGGAAACACCAGCCCTGGCTGAAGGTACAGCATCACCCCTTCCCGAGGAACTGCAGGCAGCCACTCGCCACTGTACTGCCTACTCTGCTCAGTGCTGTTTGCCACAGGCTTATTTTACtattcttcttttgtttttactaaacCTACAGATCCAAATCGAAACGTTGGCTCTCTCACTGAGGTCAACACATCAATGCAGTGCAAACTAATTTCAATCAGTTTTCGATGTGTAAGTTTTCCGAATATTTACTTTCAGATCATTATTGTTTAGGATGCACATGCTAATGTCATCACATCAGCAATCGGGGGAttcttgctttaaaatgtaagagTAACATTTTGTGATAACTGGCCGAGTATGATTAACTCATGTTGACTAGGGGAAACGACATGAATGAATGTGAATTTGCTGCATGTTTCAAGACACACaagctatattattattattattattattattattattattattat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003234 True 3259 mRNA 0.52 2 15163724 15167974

Neighbor

gene id symbol gene type direction distance location
AMCG00003242 NA coding upstream 2186 15157133 ~ 15161538 (+)
AMCG00003229 NA coding upstream 17439 15135212 ~ 15146285 (+)
AMCG00003230 NA coding upstream 107498 15052342 ~ 15056226 (+)
AMCG00003228 NA coding upstream 123960 15035951 ~ 15039764 (+)
AMCG00003224 NA coding upstream 155508 15002810 ~ 15008216 (+)
AMCG00003238 LOC107736286 coding downstream 6156 15174130 ~ 15178215 (+)
AMCG00003233 NA coding downstream 36653 15204627 ~ 15216414 (+)
AMCG00003236 NA coding downstream 72527 15240501 ~ 15250404 (+)
AMCG00003237 mxtx1,LOC107666529,LOC108415850 coding downstream 98147 15266121 ~ 15267591 (+)
AMCG00003235 bms1,LOC107566656,LOC107675025,LOC106605356,LOC106581260 coding downstream 100247 15268221 ~ 15284542 (+)
G141405 NA non-coding upstream 647214 14462167 ~ 14516510 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding upstream 654885 14500971 ~ 14508839 (+)
G141401 NA non-coding upstream 718369 14443857 ~ 14445355 (+)
G141282 NA non-coding upstream 1110042 14053469 ~ 14053682 (+)
G141249 NA non-coding upstream 1178298 13981375 ~ 13985426 (+)
G141573 NA non-coding downstream 18097 15186071 ~ 15186325 (+)
G141574 NA non-coding downstream 22009 15189983 ~ 15190345 (+)
G141582 NA non-coding downstream 49268 15217242 ~ 15217551 (+)
G141592 NA non-coding downstream 84866 15252840 ~ 15254844 (+)
G141829 NA non-coding downstream 1630985 16798959 ~ 16801312 (+)
AMCG00003207 NA other upstream 558176 14601317 ~ 14605548 (+)
AMCG00003195 NA other upstream 863731 14283850 ~ 14299993 (+)
G141331 NA other upstream 979081 14180780 ~ 14184643 (+)
AMCG00003182 NA other upstream 1032449 14122783 ~ 14131275 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 1420181 13724910 ~ 13743543 (+)
AMCG00003257 ablim1 other downstream 1296320 16464294 ~ 16500994 (+)
AMCG00003256 NA other downstream 1359215 16527189 ~ 16559206 (+)
G141962 NA other downstream 2508305 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 2553270 17721244 ~ 17725381 (+)
G142078 NA other downstream 3420600 18588574 ~ 18692204 (+)

Expression


Co-expression Network