AMCG00003242


Basic Information

Item Value
gene id AMCG00003242
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 15157133 ~ 15161538 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003242
ATGTGTGAACTCCACCTGCTGTTCCAGCCCCCCTCCACAAGCTCCATAGGTGATAAGACAGCTCCAATTAAACAGTCTCTCCTCAAGGCTACCACCGCCGCACCACACTGTGTCCAGCCCACCAGAGACTTCATTACACAGTCTCTAGGAGGGCCCATCTCATGCCTgGAATGCCTTTATCAGGAGgataatgatacatttaaagGTCAATTCCAGGCTAGCCCGACGGGGTTGCGGGATGATGGAGGGGGCTTCATAGTGGGGAAGTGcttattaaaagtaaaagtaaactGCTGGCCAGTAGGCTATGATCATGGCACTACTGAGAAAATCAGGTTGAGCGCCAGACCCCATgaggaggaggaggaggagaaggaggtggagacagacagagagagagagagagagagactggggaGGGGGGATTCACCTGTAGATGCAAGGGCCTGGACTGATCAGAGGGAATGCTTGAACTCTGACACGGCCAGGGACAGACTGAGGCACAGACAGTGGGAGGGGAGACTTGTGtcccagcactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003242 True 540 mRNA 0.53 5 15157133 15161538

Neighbor

gene id symbol gene type direction distance location
AMCG00003229 NA coding upstream 10848 15135212 ~ 15146285 (+)
AMCG00003230 NA coding upstream 100907 15052342 ~ 15056226 (+)
AMCG00003228 NA coding upstream 117369 15035951 ~ 15039764 (+)
AMCG00003224 NA coding upstream 148917 15002810 ~ 15008216 (+)
AMCG00003226 NA coding upstream 157642 14993814 ~ 14999491 (+)
AMCG00003234 NA coding downstream 2186 15163724 ~ 15167974 (+)
AMCG00003238 LOC107736286 coding downstream 12592 15174130 ~ 15178215 (+)
AMCG00003233 NA coding downstream 43089 15204627 ~ 15216414 (+)
AMCG00003236 NA coding downstream 78963 15240501 ~ 15250404 (+)
AMCG00003237 mxtx1,LOC107666529,LOC108415850 coding downstream 104583 15266121 ~ 15267591 (+)
G141405 NA non-coding upstream 640623 14462167 ~ 14516510 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding upstream 648294 14500971 ~ 14508839 (+)
G141401 NA non-coding upstream 711778 14443857 ~ 14445355 (+)
G141282 NA non-coding upstream 1103451 14053469 ~ 14053682 (+)
G141249 NA non-coding upstream 1171707 13981375 ~ 13985426 (+)
G141573 NA non-coding downstream 24533 15186071 ~ 15186325 (+)
G141574 NA non-coding downstream 28445 15189983 ~ 15190345 (+)
G141582 NA non-coding downstream 55704 15217242 ~ 15217551 (+)
G141592 NA non-coding downstream 91302 15252840 ~ 15254844 (+)
G141829 NA non-coding downstream 1637421 16798959 ~ 16801312 (+)
AMCG00003207 NA other upstream 551585 14601317 ~ 14605548 (+)
AMCG00003195 NA other upstream 857140 14283850 ~ 14299993 (+)
G141331 NA other upstream 972490 14180780 ~ 14184643 (+)
AMCG00003182 NA other upstream 1025858 14122783 ~ 14131275 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 1413590 13724910 ~ 13743543 (+)
AMCG00003257 ablim1 other downstream 1302756 16464294 ~ 16500994 (+)
AMCG00003256 NA other downstream 1365651 16527189 ~ 16559206 (+)
G141962 NA other downstream 2514741 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 2559706 17721244 ~ 17725381 (+)
G142078 NA other downstream 3427036 18588574 ~ 18692204 (+)

Expression


Co-expression Network