AMCG00003246


Basic Information

Item Value
gene id AMCG00003246
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 15564828 ~ 15573487 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003246
ATGAGTAAAAGGAAGACGTTGTGCCTTGATGATGCAGCCCCCACGTACCCCCCTGAGCGATCGGAGCACTTCAAGCCATGCCGCGACAAGGATCTGGCCTACTGTCTGAACGAGGGCGAGTGTTTCGTCATCGAGACCCTGACAGGGTCCCACAAGCACTGCAGTCGCTATGACAACAGCCCCCTGGGGACTGGAGGTGTCAACAGCGATGATGTGGCCCCCGTCTGTCAGAATTCCGATAGGACCTGTCAACATTTTAACGAAgGGCTGAAGGTGGCCCAGGCTGTGGTCAATGTCAAATCCCACGAGACTTCTGGCCTACCCCCATGTTACAGACAAATGGTCCGCAATCTCATCAAGGTCCCCTCCATCAGTCCACACCCACTGATTGAAAGAGATCTCAAGGCCCGGTTTCCAGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003246 True 423 mRNA 0.55 4 15564828 15573487

Neighbor

gene id symbol gene type direction distance location
AMCG00003245 NA coding downstream 88430 15446986 ~ 15476398 (-)
AMCG00003244 NA coding downstream 249358 15304800 ~ 15315470 (-)
AMCG00003239 NA coding downstream 305454 15252869 ~ 15259374 (-)
AMCG00003241 NA coding downstream 330038 15228535 ~ 15234790 (-)
AMCG00003240 timm23a,timm23,LOC108426535,LOC107690962,LOC107684090 coding downstream 337274 15217827 ~ 15227554 (-)
AMCG00003252 NA coding upstream 326870 15900357 ~ 15917547 (-)
AMCG00003251 NA coding upstream 637954 16211441 ~ 16220263 (-)
AMCG00003250 LOC107689951 coding upstream 663925 16237412 ~ 16267392 (-)
AMCG00003254 LOC106590870,LOC107580847 coding upstream 758320 16331807 ~ 16341749 (-)
AMCG00003255 NA coding upstream 773937 16347424 ~ 16365986 (-)
G141583 NA non-coding downstream 347021 15217474 ~ 15217807 (-)
G141571 NA non-coding downstream 392380 15163954 ~ 15172448 (-)
G141569 NA non-coding downstream 410458 15154016 ~ 15154370 (-)
G141517 NA non-coding downstream 895744 14630412 ~ 14669084 (-)
G141681 NA non-coding upstream 415448 15988935 ~ 15992678 (-)
G141704 atrnl1b,atrnl1,LOC107755548,LOC107566689,LOC107702414 non-coding upstream 434576 16008063 ~ 16061038 (-)
G141740 NA non-coding upstream 921351 16494838 ~ 16498441 (-)
G141795 NA non-coding upstream 1080204 16653691 ~ 16656167 (-)
G141871 aldh18a1,LOC107684039 non-coding upstream 1341451 16914938 ~ 16919500 (-)
AMCG00003231 NA other downstream 424009 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 890408 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 2134504 13407272 ~ 13430324 (-)
G141004 NA other downstream 2685407 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 2709487 12851021 ~ 12855341 (-)
G141826 NA other upstream 1174574 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 3970150 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 4228592 19802079 ~ 19876762 (-)

Expression


Co-expression Network